Last updated on 2025-05-11 12:50:26 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.32.4 | 8.33 | 199.53 | 207.86 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 1.32.4 | 6.10 | 133.62 | 139.72 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 1.32.4 | 339.10 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.32.4 | 391.36 | OK | |||
| r-devel-windows-x86_64 | 1.32.4 | 10.00 | 561.00 | 571.00 | NOTE | |
| r-patched-linux-x86_64 | 1.32.4 | 9.60 | 189.51 | 199.11 | NOTE | |
| r-release-linux-x86_64 | 1.32.4 | 7.69 | 193.92 | 201.61 | NOTE | |
| r-release-macos-arm64 | 1.32.4 | 132.00 | ERROR | |||
| r-release-macos-x86_64 | 1.32.4 | 304.00 | OK | |||
| r-release-windows-x86_64 | 1.32.4 | 9.00 | 659.00 | 668.00 | NOTE | |
| r-oldrel-macos-arm64 | 1.32.4 | 137.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.32.4 | 211.00 | OK | |||
| r-oldrel-windows-x86_64 | 1.32.4 | 14.00 | 561.00 | 575.00 | OK |
Version: 1.32.4
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
copyNIfTIHeader.Rd: dropImageDimension, nifti
datatype.Rd: convert.datatype, convert.bitpix
double_ortho.Rd: orthographic
ensure_array.Rd: nifti
fast_readnii.Rd: readNifti, drop_img_dim
img_list_to_ts.Rd: nifti
img_ts_to_df.Rd: nifti
img_ts_to_list.Rd: nifti
img_ts_to_matrix.Rd: nifti
ortho2.Rd: orthographic
random_nifti.Rd: nifti
readNIfTI2.Rd: readNIfTI, drop_img_dim
remake_img.Rd: nifti
replace_dropped_dimensions.Rd: nifti
rescale_img.Rd: drop_img_dim
tempimg.Rd: drop_img_dim
writeNIfTI2.Rd: writeNIfTI, drop_img_dim
write_nifti.Rd: writeNifti
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-x86_64
Version: 1.32.4
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘neurobase.Rmd’ using rmarkdown
--- finished re-building ‘neurobase.Rmd’
--- re-building ‘nifti_basics.Rmd’ using rmarkdown
--- finished re-building ‘nifti_basics.Rmd’
--- re-building ‘simple_io.Rmd’ using rmarkdown
trying URL 'https://johnmuschelli.com/open_ms_data/cross_sectional/raw/patient01/T1W.nii.gz'
Quitting from simple_io.Rmd:30-37 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `download.file()`:
! cannot open URL 'https://johnmuschelli.com/open_ms_data/cross_sectional/raw/patient01/T1W.nii.gz'
---
Backtrace:
▆
1. └─utils::download.file(url, destfile = t1_file)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'simple_io.Rmd' failed with diagnostics:
cannot open URL 'https://johnmuschelli.com/open_ms_data/cross_sectional/raw/patient01/T1W.nii.gz'
--- failed re-building ‘simple_io.Rmd’
SUMMARY: processing the following file failed:
‘simple_io.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-macos-arm64