Last updated on 2025-06-18 12:49:50 CEST.
| Package | FAIL | NOTE | OK |
|---|---|---|---|
| mixKernel | 13 | ||
| NiLeDAM | 13 | ||
| RNAseqNet | 13 | ||
| SISIR | 13 | ||
| SOMbrero | 6 | 7 | |
| treediff | 1 | 12 |
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: NOTE: 6, OK: 7
Version: 1.4-2
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
superClass.Rd: igraph
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-x86_64
Version: 1.4-2
Check: for unstated dependencies in ‘demo’
Result: NOTE
'library' or 'require' call not declared from: ‘RColorBrewer’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Current CRAN status: FAIL: 1, OK: 12
Version: 0.2.1
Check: PDF version of manual
Result: FAIL
Check process probably crashed or hung up for 20 minutes ... killed
Most likely this happened in the example checks (?),
if not, ignore the following last lines of example output:
+ })
+ return(list("trees1" = trees1, "trees2" = trees2))
+ })
>
> trees1 <- unlist(trees[1, ], recursive = FALSE)
> trees2 <- unlist(trees[2, ], recursive = FALSE)
> replicates <- c(4, 6)
>
> tree_pvals <- treediff(trees1, trees2, replicates)
> ## 4 p-values, one for each cluster
> tree_pvals$p.value
[1] 0.08861196 0.99839760 0.10829223 0.99850664
>
>
>
> ### * <FOOTER>
> ###
> cleanEx()
> options(digits = 7L)
> base::cat("Time elapsed: ", proc.time() - base::get("ptime", pos = 'CheckExEnv'),"\n")
Time elapsed: 17.41 1.33 18.96 NA NA
> grDevices::dev.off()
null device
1
> ###
> ### Local variables: ***
> ### mode: outline-minor ***
> ### outline-regexp: "\\(> \\)?### [*]+" ***
> ### End: ***
> quit('no')
======== End of example output (where/before crash/hang up occured ?) ========
Flavor: r-release-windows-x86_64