CRAN Package Check Results for Package mosaic

Last updated on 2020-05-28 21:48:50 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.7.0 26.28 333.97 360.25 OK
r-devel-linux-x86_64-debian-gcc 1.7.0 24.82 242.50 267.32 OK
r-devel-linux-x86_64-fedora-clang 1.7.0 291.11 OK
r-devel-linux-x86_64-fedora-gcc 1.7.0 425.76 OK
r-devel-windows-ix86+x86_64 1.7.0 68.00 329.00 397.00 OK
r-patched-linux-x86_64 1.7.0 22.18 323.11 345.29 OK
r-patched-solaris-x86 1.7.0 560.10 OK
r-release-linux-x86_64 1.7.0 28.49 325.20 353.69 OK
r-release-osx-x86_64 1.7.0 OK
r-release-windows-ix86+x86_64 1.7.0 54.00 498.00 552.00 ERROR
r-oldrel-osx-x86_64 1.7.0 OK
r-oldrel-windows-ix86+x86_64 1.7.0 62.00 473.00 535.00 OK

Check Details

Version: 1.7.0
Check: tests
Result: ERROR
     Running 'testthat.R' [102s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(mosaic)
     Loading required package: dplyr
    
     Attaching package: 'dplyr'
    
     The following object is masked from 'package:testthat':
    
     matches
    
     The following objects are masked from 'package:stats':
    
     filter, lag
    
     The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
     Loading required package: lattice
     Loading required package: ggformula
     Loading required package: ggplot2
     Loading required package: ggstance
    
     Attaching package: 'ggstance'
    
     The following objects are masked from 'package:ggplot2':
    
     GeomErrorbarh, geom_errorbarh
    
    
     New to ggformula? Try the tutorials:
     learnr::run_tutorial("introduction", package = "ggformula")
     learnr::run_tutorial("refining", package = "ggformula")
     Loading required package: mosaicData
     Loading required package: Matrix
     Registered S3 method overwritten by 'mosaic':
     method from
     fortify.SpatialPolygonsDataFrame ggplot2
    
     The 'mosaic' package masks several functions from core packages in order to add
     additional features. The original behavior of these functions should not be affected by this.
    
     Note: If you use the Matrix package, be sure to load it BEFORE loading mosaic.
    
     Have you tried the ggformula package for your plots?
    
     Attaching package: 'mosaic'
    
     The following object is masked from 'package:Matrix':
    
     mean
    
     The following object is masked from 'package:ggplot2':
    
     stat
    
     The following objects are masked from 'package:dplyr':
    
     count, do, tally
    
     The following objects are masked from 'package:stats':
    
     IQR, binom.test, cor, cor.test, cov, fivenum, median, prop.test,
     quantile, sd, t.test, var
    
     The following objects are masked from 'package:base':
    
     max, mean, min, prod, range, sample, sum
    
     >
     > test_check("mosaic")
     -- 1. Error: read.file works (@test-read.file.R#31) ---------------------------
     cannot open the connection
     Backtrace:
     1. mosaic::read.file("http://www.mosaic-web.org/go/datasets/Dome.csv")
     2. utils::read.csv(...)
     3. utils::read.table(...)
     4. base::file(file, "rt")
    
    
     Null distribution appears to be asymmetric. (p = 8.76e-30)
    
     Test statistic applied to sample data = 18
    
     Quantiles of test statistic applied to random data:
     50% 90% 95% 99%
     16 19 20 22
    
     Of the 1000 samples (1 original + 999 random),
     131 ( 13.1 % ) had test stats = 18
     297 ( 29.7 % ) had test stats >= 18
    
     Null distribution appears to be asymmetric. (p = 2.28e-06)
    
     Test statistic applied to sample data = 18
    
     Quantiles of test statistic applied to random data:
     50% 90% 95% 99%
     10.00000 26.00000 31.33333 48.69333
    
     Of the 1000 samples (1 original + 999 random),
     33 ( 3.3 % ) had test stats = 18
     240 ( 24 % ) had test stats >= 18
    
     Null distribution appears to be asymmetric. (p = 8.76e-30)
    
     Test statistic applied to sample data = 18
    
     Quantiles of test statistic applied to random data:
     50% 90% 95% 99%
     16 19 20 22
    
     Of the 1000 samples (1 original + 999 random),
     131 ( 13.1 % ) had test stats = 18
     297 ( 29.7 % ) had test stats >= 18
     [1] 0.9331928
     [1] 567.449
     == testthat results ===========================================================
     [ OK: 287 | SKIPPED: 72 | WARNINGS: 7 | FAILED: 1 ]
     1. Error: read.file works (@test-read.file.R#31)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-release-windows-ix86+x86_64

Version: 1.7.0
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building 'Resampling.Rmd' using rmarkdown
    Quitting from lines 156-157 (Resampling.Rmd)
    Error: processing vignette 'Resampling.Rmd' failed with diagnostics:
    cannot open the connection
    --- failed re-building 'Resampling.Rmd'
    
    --- re-building 'mosaic-resources.Rmd' using rmarkdown
    --- finished re-building 'mosaic-resources.Rmd'
    
    --- re-building 'MinimalRgg.Rnw' using knitr
    Loading required package: mosaic
    Loading required package: dplyr
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    Loading required package: lattice
    Loading required package: ggformula
    Loading required package: ggplot2
    Loading required package: ggstance
    
    Attaching package: 'ggstance'
    
    The following objects are masked from 'package:ggplot2':
    
     GeomErrorbarh, geom_errorbarh
    
    
    New to ggformula? Try the tutorials:
     learnr::run_tutorial("introduction", package = "ggformula")
     learnr::run_tutorial("refining", package = "ggformula")
    Loading required package: mosaicData
    Loading required package: Matrix
    Registered S3 method overwritten by 'mosaic':
     method from
     fortify.SpatialPolygonsDataFrame ggplot2
    
    The 'mosaic' package masks several functions from core packages in order to add
    additional features. The original behavior of these functions should not be affected by this.
    
    Note: If you use the Matrix package, be sure to load it BEFORE loading mosaic.
    
    Have you tried the ggformula package for your plots?
    
    Attaching package: 'mosaic'
    
    The following object is masked from 'package:Matrix':
    
     mean
    
    The following object is masked from 'package:ggplot2':
    
     stat
    
    The following objects are masked from 'package:dplyr':
    
     count, do, tally
    
    The following objects are masked from 'package:stats':
    
     IQR, binom.test, cor, cor.test, cov, fivenum, median, prop.test,
     quantile, sd, t.test, var
    
    The following objects are masked from 'package:base':
    
     max, mean, min, prod, range, sample, sum
    
    Loading required package: parallel
    Using parallel package.
     * Set seed with set.rseed().
     * Disable this message with options(`mosaic:parallelMessage` = FALSE)
    
    Using parallel package.
     * Set seed with set.rseed().
     * Disable this message with options(`mosaic:parallelMessage` = FALSE)
    
    --- finished re-building 'MinimalRgg.Rnw'
    
    SUMMARY: processing the following file failed:
     'Resampling.Rmd'
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-release-windows-ix86+x86_64