Last updated on 2023-12-06 12:53:39 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.2.0 | 6.79 | 232.65 | 239.44 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.2.0 | 5.04 | 175.48 | 180.52 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.2.0 | 285.48 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.2.0 | 288.50 | OK | |||
| r-devel-windows-x86_64 | 0.2.0 | 7.00 | 169.00 | 176.00 | ERROR | |
| r-patched-linux-x86_64 | 0.2.0 | 5.91 | 219.44 | 225.35 | OK | |
| r-release-linux-x86_64 | 0.2.0 | 3.99 | 224.55 | 228.54 | OK | |
| r-release-macos-arm64 | 0.2.0 | 91.00 | OK | |||
| r-release-macos-x86_64 | 0.2.0 | 170.00 | OK | |||
| r-release-windows-x86_64 | 0.2.0 | 9.00 | 228.00 | 237.00 | ERROR | |
| r-oldrel-macos-arm64 | 0.2.0 | 93.00 | OK | |||
| r-oldrel-macos-x86_64 | 0.2.0 | 105.00 | OK | |||
| r-oldrel-windows-x86_64 | 0.2.0 | 9.00 | 225.00 | 234.00 | ERROR |
Version: 0.2.0
Check: examples
Result: ERROR
Running examples in 'matric-Ex.R' failed
The error most likely occurred in:
> ### Name: sim_read
> ### Title: Read similarity matrix.
> ### Aliases: sim_read
>
> ### ** Examples
>
> suppressMessages(suppressWarnings(library(magrittr)))
> population <- tibble::tibble(
+ Metadata_group = sample(c("a", "b"), 4, replace = TRUE),
+ x = rnorm(4),
+ y = x + rnorm(4) / 100,
+ z = y + rnorm(4) / 1000
+ )
> tmpdir <- tempdir()
> tmpfile_prefix <- file.path(tmpdir, "test")
> tmpfile_parquet <- file.path(tmpdir, "test.pqrquet")
> sim_df <- sim_calculate(population, method = "pearson")
> sim_df %>% sim_write(tmpfile_prefix, file_format = "csv")
INFO [2023-12-04 09:10:22] Creating D:\temp\Rtmp869EOg/test ...
INFO [2023-12-04 09:10:22] Writing D:\temp\Rtmp869EOg/test/test.csv ...
INFO [2023-12-04 09:10:22] Writing D:\temp\Rtmp869EOg/test/test_metadata.csv ...
INFO [2023-12-04 09:10:22] Writing D:\temp\Rtmp869EOg/test/test_metadata.json ...
NULL
> sim_df_csv <- sim_read(tmpfile_prefix, file_format = "csv")
INFO [2023-12-04 09:10:22] Reading D:\temp\Rtmp869EOg/test/test.csv ...
INFO [2023-12-04 09:10:22] Reading D:\temp\Rtmp869EOg/test/test_metadata.csv ...
INFO [2023-12-04 09:10:22] Reading D:\temp\Rtmp869EOg/test/test_metadata.json ...
> sim_df %>% sim_write(tmpfile_parquet)
INFO [2023-12-04 09:10:22] Writing D:\temp\Rtmp869EOg/test.pqrquet ...
NULL
> sim_df_parquet1 <- sim_read(tmpfile_parquet)
> sim_df %>% arrow::write_parquet(tmpfile_parquet)
Error: IOError: Failed to open local file 'D:/temp/Rtmp869EOg/test.pqrquet'. Detail: [Windows error 1224] Der Vorgang ist bei einer Datei mit einem geöffneten Bereich, der einem Benutzer zugeordnet ist, nicht anwendbar.
Execution halted
Flavor: r-devel-windows-x86_64
Version: 0.2.0
Check: tests
Result: ERROR
Running 'testthat.R' [70s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(matric)
>
> test_check("matric")
Attaching package: 'purrr'
The following object is masked from 'package:testthat':
is_null
The following object is masked from 'package:base':
%||%
[ FAIL 1 | WARN 66 | SKIP 0 | PASS 93 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-sim_read-write.R:100:3'): `sim_read` works ─────────────────────
Error: IOError: Failed to open local file 'D:/temp/Rtmp8KBwLG/test.parquet'. Detail: [Windows error 1224] Der Vorgang ist bei einer Datei mit einem geöffneten Bereich, der einem Benutzer zugeordnet ist, nicht anwendbar.
Backtrace:
▆
1. ├─sim_df %>% arrow::write_parquet(tmp_parquet_file) at test-sim_read-write.R:100:3
2. └─arrow::write_parquet(., tmp_parquet_file)
3. └─arrow:::make_output_stream(sink)
4. └─FileOutputStream$create(x)
5. └─arrow:::io___FileOutputStream__Open(clean_path_abs(path))
[ FAIL 1 | WARN 66 | SKIP 0 | PASS 93 ]
Error: Test failures
Execution halted
Flavor: r-devel-windows-x86_64
Version: 0.2.0
Check: examples
Result: ERROR
Running examples in 'matric-Ex.R' failed
The error most likely occurred in:
> ### Name: sim_read
> ### Title: Read similarity matrix.
> ### Aliases: sim_read
>
> ### ** Examples
>
> suppressMessages(suppressWarnings(library(magrittr)))
> population <- tibble::tibble(
+ Metadata_group = sample(c("a", "b"), 4, replace = TRUE),
+ x = rnorm(4),
+ y = x + rnorm(4) / 100,
+ z = y + rnorm(4) / 1000
+ )
> tmpdir <- tempdir()
> tmpfile_prefix <- file.path(tmpdir, "test")
> tmpfile_parquet <- file.path(tmpdir, "test.pqrquet")
> sim_df <- sim_calculate(population, method = "pearson")
> sim_df %>% sim_write(tmpfile_prefix, file_format = "csv")
INFO [2023-12-05 08:08:56] Creating D:\temp\RtmpyUFNFh/test ...
INFO [2023-12-05 08:08:56] Writing D:\temp\RtmpyUFNFh/test/test.csv ...
INFO [2023-12-05 08:08:56] Writing D:\temp\RtmpyUFNFh/test/test_metadata.csv ...
INFO [2023-12-05 08:08:56] Writing D:\temp\RtmpyUFNFh/test/test_metadata.json ...
NULL
> sim_df_csv <- sim_read(tmpfile_prefix, file_format = "csv")
INFO [2023-12-05 08:08:56] Reading D:\temp\RtmpyUFNFh/test/test.csv ...
INFO [2023-12-05 08:08:56] Reading D:\temp\RtmpyUFNFh/test/test_metadata.csv ...
INFO [2023-12-05 08:08:56] Reading D:\temp\RtmpyUFNFh/test/test_metadata.json ...
> sim_df %>% sim_write(tmpfile_parquet)
INFO [2023-12-05 08:08:56] Writing D:\temp\RtmpyUFNFh/test.pqrquet ...
NULL
> sim_df_parquet1 <- sim_read(tmpfile_parquet)
> sim_df %>% arrow::write_parquet(tmpfile_parquet)
Error: IOError: Failed to open local file 'D:/temp/RtmpyUFNFh/test.pqrquet'. Detail: [Windows error 1224] Der Vorgang ist bei einer Datei mit einem geöffneten Bereich, der einem Benutzer zugeordnet ist, nicht anwendbar.
Execution halted
Flavor: r-release-windows-x86_64
Version: 0.2.0
Check: tests
Result: ERROR
Running 'testthat.R' [107s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(matric)
>
> test_check("matric")
Attaching package: 'purrr'
The following object is masked from 'package:testthat':
is_null
[ FAIL 1 | WARN 66 | SKIP 0 | PASS 93 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-sim_read-write.R:100:3'): `sim_read` works ─────────────────────
Error: IOError: Failed to open local file 'D:/temp/RtmpwTdv7H/test.parquet'. Detail: [Windows error 1224] Der Vorgang ist bei einer Datei mit einem geöffneten Bereich, der einem Benutzer zugeordnet ist, nicht anwendbar.
Backtrace:
▆
1. ├─sim_df %>% arrow::write_parquet(tmp_parquet_file) at test-sim_read-write.R:100:3
2. └─arrow::write_parquet(., tmp_parquet_file)
3. └─arrow:::make_output_stream(sink)
4. └─FileOutputStream$create(x)
5. └─arrow:::io___FileOutputStream__Open(clean_path_abs(path))
[ FAIL 1 | WARN 66 | SKIP 0 | PASS 93 ]
Error: Test failures
Execution halted
Flavor: r-release-windows-x86_64
Version: 0.2.0
Check: examples
Result: ERROR
Running examples in 'matric-Ex.R' failed
The error most likely occurred in:
> ### Name: sim_read
> ### Title: Read similarity matrix.
> ### Aliases: sim_read
>
> ### ** Examples
>
> suppressMessages(suppressWarnings(library(magrittr)))
> population <- tibble::tibble(
+ Metadata_group = sample(c("a", "b"), 4, replace = TRUE),
+ x = rnorm(4),
+ y = x + rnorm(4) / 100,
+ z = y + rnorm(4) / 1000
+ )
> tmpdir <- tempdir()
> tmpfile_prefix <- file.path(tmpdir, "test")
> tmpfile_parquet <- file.path(tmpdir, "test.pqrquet")
> sim_df <- sim_calculate(population, method = "pearson")
> sim_df %>% sim_write(tmpfile_prefix, file_format = "csv")
INFO [2023-12-02 15:21:57] Creating D:\temp\RtmpYDxNXR/test ...
INFO [2023-12-02 15:21:57] Writing D:\temp\RtmpYDxNXR/test/test.csv ...
INFO [2023-12-02 15:21:58] Writing D:\temp\RtmpYDxNXR/test/test_metadata.csv ...
INFO [2023-12-02 15:21:58] Writing D:\temp\RtmpYDxNXR/test/test_metadata.json ...
NULL
> sim_df_csv <- sim_read(tmpfile_prefix, file_format = "csv")
INFO [2023-12-02 15:21:58] Reading D:\temp\RtmpYDxNXR/test/test.csv ...
INFO [2023-12-02 15:21:58] Reading D:\temp\RtmpYDxNXR/test/test_metadata.csv ...
INFO [2023-12-02 15:21:58] Reading D:\temp\RtmpYDxNXR/test/test_metadata.json ...
> sim_df %>% sim_write(tmpfile_parquet)
INFO [2023-12-02 15:21:58] Writing D:\temp\RtmpYDxNXR/test.pqrquet ...
NULL
> sim_df_parquet1 <- sim_read(tmpfile_parquet)
> sim_df %>% arrow::write_parquet(tmpfile_parquet)
Error: IOError: Failed to open local file 'D:/temp/RtmpYDxNXR/test.pqrquet'. Detail: [Windows error 1224] Der Vorgang ist bei einer Datei mit einem geöffneten Bereich, der einem Benutzer zugeordnet ist, nicht anwendbar.
Execution halted
Flavor: r-oldrel-windows-x86_64
Version: 0.2.0
Check: tests
Result: ERROR
Running 'testthat.R' [104s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(matric)
>
> test_check("matric")
Attaching package: 'purrr'
The following object is masked from 'package:testthat':
is_null
[ FAIL 1 | WARN 66 | SKIP 0 | PASS 93 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-sim_read-write.R:98:3'): `sim_read` works ──────────────────────
Error: IOError: Failed to open local file 'D:/temp/Rtmpq09dQJ/test.parquet'. Detail: [Windows error 1224] Der Vorgang ist bei einer Datei mit einem geöffneten Bereich, der einem Benutzer zugeordnet ist, nicht anwendbar.
Backtrace:
▆
1. ├─sim_df %>% sim_write(tmp_parquet_file) at test-sim_read-write.R:98:3
2. ├─matric::sim_write(., tmp_parquet_file)
3. │ └─sim_df %>% arrow::write_parquet(output)
4. └─arrow::write_parquet(., output)
5. └─arrow:::make_output_stream(sink)
6. └─FileOutputStream$create(x)
7. └─arrow:::io___FileOutputStream__Open(clean_path_abs(path))
[ FAIL 1 | WARN 66 | SKIP 0 | PASS 93 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-windows-x86_64