Last updated on 2026-01-23 12:49:55 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.04 | 262.25 | 274.29 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.68 | 208.97 | 219.65 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 26.00 | 298.75 | 324.75 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 30.00 | 403.35 | 433.35 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 19.00 | 193.00 | 212.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 16.07 | 259.11 | 275.18 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.99 | 270.09 | 284.08 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 294.00 | 304.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 191.00 | 211.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 318.00 | 328.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 26.00 | 254.00 | 280.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [102s/244s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.582, system: 0.044, elapsed: 2.501 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.534, system: 0.081, elapsed: 11.846 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.354, system: 0.031, elapsed: 0.240 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.717, system: 0.839, elapsed: 68.562 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.003, elapsed: 0.235 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.104, system: 1.027, elapsed: 84.289 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.554, system: 0.035, elapsed: 2.267 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.655, system: 0.099, elapsed: 13.086 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.278, system: 0.024, elapsed: 0.234 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.944, system: 0.865, elapsed: 6.426 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.003, elapsed: 0.183 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.225, system: 1.052, elapsed: 22.900 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.558, system: 0.030, elapsed: 2.274 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.528, system: 0.089, elapsed: 12.081 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.304, system: 0.014, elapsed: 0.609 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.407, system: 0.632, elapsed: 25.879 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.004, elapsed: 0.227 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.238, system: 0.341, elapsed: 1.166 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.920, system: 1.150, elapsed: 43.125 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.545, system: 0.038, elapsed: 2.520 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.712, system: 0.134, elapsed: 16.728 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.016, elapsed: 0.633 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.607, system: 0.704, elapsed: 52.255 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.003, elapsed: 0.183 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.253, system: 0.614, elapsed: 14.003 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.221, system: 1.542, elapsed: 87.198 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/232s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.575, system: 0.036, elapsed: 4.480 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.531, system: 0.048, elapsed: 27.667 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.014, elapsed: 0.627 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.246, system: 0.429, elapsed: 13.549 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.003, elapsed: 0.522 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.294, system: 0.551, elapsed: 48.560 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.578, system: 0.032, elapsed: 4.613 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.585, system: 0.053, elapsed: 26.200 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.015, elapsed: 0.611 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.311, system: 0.426, elapsed: 12.652 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.441 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.395, system: 0.551, elapsed: 46.139 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.518, system: 0.028, elapsed: 3.981 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.646, system: 0.052, elapsed: 25.627 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.013, elapsed: 0.596 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.316, system: 0.419, elapsed: 12.775 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.003, elapsed: 0.531 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.229, system: 0.324, elapsed: 2.416 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.752, system: 0.863, elapsed: 47.818 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.622, system: 0.031, elapsed: 4.689 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.652, system: 0.102, elapsed: 26.775 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.015, elapsed: 0.615 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.345, system: 0.465, elapsed: 14.148 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.007, elapsed: 0.450 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.881, system: 0.561, elapsed: 27.105 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.551, system: 1.205, elapsed: 75.776 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64