Last updated on 2025-12-26 12:49:59 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.06 | 244.27 | 258.33 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 9.89 | 314.83 | 324.72 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 25.00 | 289.70 | 314.70 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 27.00 | 350.69 | 377.69 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 190.00 | 211.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.19 | 283.55 | 298.74 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.77 | 256.04 | 269.81 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 13.00 | 330.00 | 343.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 192.00 | 213.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 12.00 | 520.00 | 532.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 26.00 | 236.00 | 262.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [98s/249s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.884, system: 0.117, elapsed: 6.460 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.198, system: 0.442, elapsed: 30.679 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.026, elapsed: 0.484 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 5.195, system: 0.808, elapsed: 15.605 seconds]
Computing values for grid cells...
... done. [user: 0.199, system: 0.017, elapsed: 0.445 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.319, system: 1.526, elapsed: 55.640 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.981, system: 0.137, elapsed: 4.614 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.174, system: 0.499, elapsed: 22.799 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.022, elapsed: 0.365 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 5.072, system: 0.701, elapsed: 9.638 seconds]
Computing values for grid cells...
... done. [user: 0.200, system: 0.017, elapsed: 0.468 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.222, system: 1.427, elapsed: 39.230 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.827, system: 0.127, elapsed: 2.622 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.462, system: 0.602, elapsed: 45.745 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.206, system: 0.027, elapsed: 0.639 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.965, system: 0.646, elapsed: 16.251 seconds]
Computing values for grid cells...
... done. [user: 0.189, system: 0.009, elapsed: 0.390 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.281, system: 0.273, elapsed: 1.695 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.671, system: 1.825, elapsed: 69.537 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.656, system: 0.067, elapsed: 4.413 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.209, system: 0.261, elapsed: 21.070 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.210, system: 0.021, elapsed: 0.387 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.818, system: 0.555, elapsed: 11.205 seconds]
Computing values for grid cells...
... done. [user: 0.206, system: 0.009, elapsed: 0.482 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.617, system: 0.809, elapsed: 27.301 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 29.413, system: 1.755, elapsed: 66.308 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [95s/361s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.830, system: 0.085, elapsed: 7.434 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.109, system: 0.258, elapsed: 35.819 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.220, system: 0.033, elapsed: 1.071 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.693, system: 0.597, elapsed: 19.726 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.007, elapsed: 0.694 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.684, system: 1.104, elapsed: 67.932 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.760, system: 0.079, elapsed: 6.924 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.950, system: 0.222, elapsed: 34.124 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.216, system: 0.031, elapsed: 0.988 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.736, system: 0.611, elapsed: 19.490 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.009, elapsed: 0.678 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.497, system: 1.200, elapsed: 65.380 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.774, system: 0.072, elapsed: 6.426 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.020, system: 0.237, elapsed: 41.805 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.208, system: 0.023, elapsed: 0.830 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.685, system: 0.673, elapsed: 20.685 seconds]
Computing values for grid cells...
... done. [user: 0.196, system: 0.013, elapsed: 0.665 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.239, system: 0.329, elapsed: 2.272 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.885, system: 1.486, elapsed: 75.667 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.702, system: 0.053, elapsed: 5.533 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.127, system: 0.264, elapsed: 48.590 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.210, system: 0.030, elapsed: 1.141 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.678, system: 0.587, elapsed: 24.636 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.007, elapsed: 0.615 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.435, system: 0.916, elapsed: 45.296 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 29.093, system: 2.156, elapsed: 130.459 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64