Last updated on 2025-07-29 06:48:51 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.75 | 253.23 | 265.98 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.66 | 217.19 | 227.85 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.52 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 369.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.69 | 261.54 | 276.23 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.10 | 257.90 | 272.00 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 156.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 205.00 | 225.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 168.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 237.00 | 261.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/107s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.441, system: 0.034, elapsed: 1.765 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.868, system: 0.115, elapsed: 10.859 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.013, elapsed: 0.198 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.556, system: 0.167, elapsed: 3.881 seconds]
Computing values for grid cells...
... done. [user: 0.155, system: 0.002, elapsed: 0.160 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.718, system: 0.353, elapsed: 17.442 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.430, system: 0.029, elapsed: 2.108 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.932, system: 0.072, elapsed: 13.493 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.012, elapsed: 0.419 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.756, system: 0.165, elapsed: 7.080 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.309 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.999, system: 0.301, elapsed: 24.232 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.484, system: 0.029, elapsed: 2.305 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.956, system: 0.059, elapsed: 13.371 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.382 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.610, system: 0.170, elapsed: 5.713 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.005, elapsed: 0.301 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.153, system: 0.232, elapsed: 1.238 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.167, system: 0.527, elapsed: 24.436 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.485, system: 0.033, elapsed: 1.997 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.915, system: 0.074, elapsed: 12.171 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.012, elapsed: 0.273 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.691, system: 0.178, elapsed: 5.229 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.003, elapsed: 0.217 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.236, system: 0.459, elapsed: 14.270 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.306, system: 0.792, elapsed: 35.108 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/118s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.474, system: 0.035, elapsed: 1.619 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.897, system: 0.050, elapsed: 11.543 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.014, elapsed: 0.362 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.588, system: 0.181, elapsed: 6.786 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.330 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.848, system: 0.305, elapsed: 21.517 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.493, system: 0.030, elapsed: 2.619 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.018, system: 0.062, elapsed: 14.698 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.012, elapsed: 0.466 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.613, system: 0.163, elapsed: 9.354 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.369 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.999, system: 0.293, elapsed: 28.686 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.473, system: 0.025, elapsed: 3.471 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.032, system: 0.071, elapsed: 16.551 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.011, elapsed: 0.341 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.587, system: 0.163, elapsed: 5.268 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.003, elapsed: 0.203 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.091, system: 0.220, elapsed: 0.890 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.187, system: 0.527, elapsed: 27.973 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.507, system: 0.030, elapsed: 1.927 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.053, system: 0.160, elapsed: 12.748 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.013, elapsed: 0.212 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.483, system: 0.210, elapsed: 4.111 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.002, elapsed: 0.165 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.076, system: 0.529, elapsed: 14.059 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.078, system: 0.973, elapsed: 34.016 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64