CRAN Package Check Results for Maintainer ‘Luis Cayuela <luis.cayuela at urjc.es>’

Last updated on 2024-10-31 10:50:27 CET.

Package WARN NOTE OK
betaper 1 12
rareNMtests 10 3

Package betaper

Current CRAN status: WARN: 1, OK: 12

Version: 1.1-2
Check: examples
Result: WARN Found the following significant warnings: Warning: 'adonis' is deprecated. Warning: 'adonis' is deprecated. Warning: 'adonis' is deprecated. Warning: 'adonis' is deprecated. Warning: 'adonis' is deprecated. Deprecated functions may be defunct as soon as of the next release of R. See ?Deprecated. Flavor: r-oldrel-windows-x86_64

Package rareNMtests

Current CRAN status: NOTE: 10, OK: 3

Version: 1.2
Check: Rd files
Result: NOTE checkRd: (-1) BiogTest.individual.Rd:25: Lost braces 25 | \item{powerfun}{ By default rarefied richness is estimated for all subsample sizes, from 1 to \emph{n}, where \emph{n} is the total number of individuals in the sample. If \code{powerfun} is less than 1, it decreases the total number of subsamples as a power function of \{h{n}. } | ^ checkRd: (-1) BiogTest.individual.Rd:66: Lost braces 66 | Chao, A., Gotelli, N.J., Hsieh, T.C., Sander, E.L., Ma, K.H., Colwell, R.K. & Ellison, A.M. (2014). Rarefaction and extrapolation with Hill numbers: a framework for sampling and estimation in species diversity studies. emph{Ecological Monographs} 84: 45-67. | ^ checkRd: (-1) BiogTest.individual.Rd:68: Lost braces 68 | Limpert, E., Stahel, W.A. & Abbt, M. (2001). Log-normal distributions across the sciences: keys and clues. emph{BioScience} 51: 341-352. | ^ checkRd: (-1) BiogTest.individual.Rd:70: Lost braces 70 | O'Hara, R.B. (2005). Species richness estimators: how many species can dance on the head of a pin? emph{Journal of Animal Ecology} 74: 375-386. | ^ checkRd: (-1) EcoTest.individual.Rd:57: Lost braces 57 | Chao, A., Gotelli, N.J., Hsieh, T.C., Sander, E.L., Ma, K.H., Colwell, R.K. & Ellison, A.M. (2014). Rarefaction and extrapolation with Hill numbers: a framework for sampling and estimation in species diversity studies. emph{Ecological Monographs} 84: 45-67. | ^ checkRd: (-1) rarefaction.individual.Rd:37: Lost braces 37 | Chao, A., Gotelli, N.J., Hsieh, T.C., Sander, E.L., Ma, K.H., Colwell, R.K. & Ellison, A.M. (2014). Rarefaction and extrapolation with Hill numbers: a framework for sampling and estimation in species diversity studies. emph{Ecological Monographs} 84: 45-67. | ^ checkRd: (-1) rarefaction.individual.Rd:39: Lost braces 39 | Chao, A. & Jost, J. (2012). Coverage-based rarefaction and extrapolation: standardizing samples by completeness rather than size. emph{Ecology} 93: 2533-2547. | ^ checkRd: (-1) rarefaction.individual.Rd:41: Lost braces 41 | Hill, M.O. (1973). Diversity and evenness: a unifying notation and its consequences. emph{Ecology} 54: 427-432. | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64