Last updated on 2024-05-15 12:14:49 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.3.0 | 60.71 | 582.13 | 642.84 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.3.0 | 48.47 | 408.46 | 456.93 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.3.0 | 827.23 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.3.0 | 840.94 | OK | |||
| r-devel-windows-x86_64 | 0.3.0 | 49.00 | 381.00 | 430.00 | OK | |
| r-patched-linux-x86_64 | 0.3.0 | 54.12 | 564.59 | 618.71 | OK | |
| r-release-linux-x86_64 | 0.3.0 | 40.72 | 543.47 | 584.19 | OK | |
| r-release-macos-arm64 | 0.3.0 | 191.00 | NOTE | |||
| r-release-macos-x86_64 | 0.3.0 | 542.00 | NOTE | |||
| r-release-windows-x86_64 | 0.3.0 | 50.00 | 386.00 | 436.00 | OK | |
| r-oldrel-macos-arm64 | 0.3.0 | 192.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 0.3.0 | 419.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 0.3.0 | 69.00 | 466.00 | 535.00 | NOTE |
Version: 0.3.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘locuszoomr.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/locuszoomr.Rcheck/vign_test/locuszoomr/vignettes/locuszoomr_files/figure-html/unnamed-chunk-6-1.png
1536x1344 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 199819 bytes
Input file size = 200185 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 150685
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 150685
Output IDAT size = 150685 bytes (49134 bytes decrease)
Output file size = 150763 bytes (49422 bytes = 24.69% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/locuszoomr.Rcheck/vign_test/locuszoomr/vignettes/locuszoomr_files/figure-html/unnamed-chunk-11-1.png
1536x1344 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 213348 bytes
Input file size = 213738 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 166476
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 166476
Output IDAT size = 166476 bytes (46872 bytes decrease)
Output file size = 166554 bytes (47184 bytes = 22.08% decrease)
Quitting from lines at lines 211-217 [unnamed-chunk-12] (locuszoomr.Rmd)
Error: processing vignette 'locuszoomr.Rmd' failed with diagnostics:
cannot open URL 'https://hgdownload.soe.ucsc.edu/goldenPath/hg19/database/chromInfo.txt.gz'
--- failed re-building ‘locuszoomr.Rmd’
SUMMARY: processing the following file failed:
‘locuszoomr.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.3.0
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘EnsDb.Hsapiens.v75’
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 0.3.0
Check: re-building of vignette outputs
Result: NOTE
Note: skipping ‘locuszoomr.Rmd’ due to unavailable dependencies:
'EnsDb.Hsapiens.v75'
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64