CRAN Package Check Results for Package jtools

Last updated on 2020-04-09 12:47:54 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.0.3 12.82 193.78 206.60 ERROR
r-devel-linux-x86_64-debian-gcc 2.0.3 9.42 144.82 154.24 ERROR
r-devel-linux-x86_64-fedora-clang 2.0.3 207.04 OK
r-devel-linux-x86_64-fedora-gcc 2.0.3 242.49 ERROR
r-devel-windows-ix86+x86_64 2.0.3 25.00 161.00 186.00 OK
r-devel-windows-ix86+x86_64-gcc8 2.0.3 22.00 171.00 193.00 OK
r-patched-linux-x86_64 2.0.3 13.59 182.39 195.98 ERROR
r-patched-osx-x86_64 2.0.3 WARN
r-patched-solaris-x86 2.0.3 264.20 OK
r-release-linux-x86_64 2.0.3 10.92 170.90 181.82 ERROR
r-release-windows-ix86+x86_64 2.0.3 21.00 246.00 267.00 OK
r-release-osx-x86_64 2.0.3 OK
r-oldrel-windows-ix86+x86_64 2.0.3 23.00 226.00 249.00 WARN
r-oldrel-osx-x86_64 2.0.3 WARN

Check Details

Version: 2.0.3
Check: tests
Result: ERROR
     Running 'testthat.R' [68s/78s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(jtools)
     >
     >
     > test_check("jtools")
     -- 1. Error: plot_coefs works with brms (@test-export-summs.R#294) ------------
     Aesthetics must be either length 1 or the same as the data (8): xmin and xmax
     Backtrace:
     1. testthat::expect_silent(print(plot_coefs(bfit1) + ggtitle("basic brms fit")))
     10. ggplot2:::print.ggplot(plot_coefs(bfit1) + ggtitle("basic brms fit"))
     12. ggplot2:::ggplot_build.ggplot(x)
     13. ggplot2:::by_layer(function(l, d) l$compute_aesthetics(d, plot))
     14. ggplot2:::f(l = layers[[i]], d = data[[i]])
     15. l$compute_aesthetics(d, plot)
     16. ggplot2:::f(..., self = self)
     17. ggplot2:::check_aesthetics(evaled, n)
    
     == testthat results ===========================================================
     [ OK: 357 | SKIPPED: 0 | WARNINGS: 11 | FAILED: 1 ]
     1. Error: plot_coefs works with brms (@test-export-summs.R#294)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-debian-clang

Version: 2.0.3
Check: tests
Result: ERROR
     Running ‘testthat.R’ [50s/73s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(jtools)
     >
     >
     > test_check("jtools")
     ── 1. Error: plot_coefs works with brms (@test-export-summs.R#294) ────────────
     Aesthetics must be either length 1 or the same as the data (8): xmin and xmax
     Backtrace:
     1. testthat::expect_silent(print(plot_coefs(bfit1) + ggtitle("basic brms fit")))
     10. ggplot2:::print.ggplot(plot_coefs(bfit1) + ggtitle("basic brms fit"))
     12. ggplot2:::ggplot_build.ggplot(x)
     13. ggplot2:::by_layer(function(l, d) l$compute_aesthetics(d, plot))
     14. ggplot2:::f(l = layers[[i]], d = data[[i]])
     15. l$compute_aesthetics(d, plot)
     16. ggplot2:::f(..., self = self)
     17. ggplot2:::check_aesthetics(evaled, n)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 357 | SKIPPED: 0 | WARNINGS: 11 | FAILED: 1 ]
     1. Error: plot_coefs works with brms (@test-export-summs.R#294)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 2.0.3
Check: tests
Result: ERROR
     Running ‘testthat.R’ [78s/95s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(jtools)
     >
     >
     > test_check("jtools")
     ── 1. Error: plot_coefs works with brms (@test-export-summs.R#294) ────────────
     Aesthetics must be either length 1 or the same as the data (8): xmin and xmax
     Backtrace:
     1. testthat::expect_silent(print(plot_coefs(bfit1) + ggtitle("basic brms fit")))
     10. ggplot2:::print.ggplot(plot_coefs(bfit1) + ggtitle("basic brms fit"))
     12. ggplot2:::ggplot_build.ggplot(x)
     13. ggplot2:::by_layer(function(l, d) l$compute_aesthetics(d, plot))
     14. ggplot2:::f(l = layers[[i]], d = data[[i]])
     15. l$compute_aesthetics(d, plot)
     16. ggplot2:::f(..., self = self)
     17. ggplot2:::check_aesthetics(evaled, n)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 357 | SKIPPED: 0 | WARNINGS: 11 | FAILED: 1 ]
     1. Error: plot_coefs works with brms (@test-export-summs.R#294)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 2.0.3
Check: tests
Result: ERROR
     Running ‘testthat.R’ [62s/68s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(jtools)
     >
     >
     > test_check("jtools")
     ── 1. Error: plot_coefs works with brms (@test-export-summs.R#294) ────────────
     Aesthetics must be either length 1 or the same as the data (8): xmin and xmax
     Backtrace:
     1. testthat::expect_silent(print(plot_coefs(bfit1) + ggtitle("basic brms fit")))
     10. ggplot2:::print.ggplot(plot_coefs(bfit1) + ggtitle("basic brms fit"))
     12. ggplot2:::ggplot_build.ggplot(x)
     13. ggplot2:::by_layer(function(l, d) l$compute_aesthetics(d, plot))
     14. ggplot2:::f(l = layers[[i]], d = data[[i]])
     15. l$compute_aesthetics(d, plot)
     16. ggplot2:::f(..., self = self)
     17. ggplot2:::check_aesthetics(evaled, n)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 357 | SKIPPED: 0 | WARNINGS: 11 | FAILED: 1 ]
     1. Error: plot_coefs works with brms (@test-export-summs.R#294)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-patched-linux-x86_64

Version: 2.0.3
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘effect_plot.Rmd’ using rmarkdown
    Using data mpg from global environment. This could cause incorrect results
    if mpg has been altered since the model was fit. You can manually provide
    the data to the "data =" argument.
    Using data mpg from global environment. This could cause incorrect results
    if mpg has been altered since the model was fit. You can manually provide
    the data to the "data =" argument.
    Using data Insurance from global environment. This could cause incorrect
    results if Insurance has been altered since the model was fit. You can
    manually provide the data to the "data =" argument.
    Outcome is based on a total of 1 exposures
    Using data Insurance from global environment. This could cause incorrect
    results if Insurance has been altered since the model was fit. You can
    manually provide the data to the "data =" argument.
    Outcome is based on a total of 1 exposures
    Using data Insurance from global environment. This could cause incorrect
    results if Insurance has been altered since the model was fit. You can
    manually provide the data to the "data =" argument.
    Outcome is based on a total of 1 exposures
    Using data Insurance from global environment. This could cause incorrect
    results if Insurance has been altered since the model was fit. You can
    manually provide the data to the "data =" argument.
    Outcome is based on a total of 1 exposures
    dyld: lazy symbol binding failed: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    dyld: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    Error: processing vignette 'effect_plot.Rmd' failed with diagnostics:
    pandoc document conversion failed with error 6
    --- failed re-building ‘effect_plot.Rmd’
    
    --- re-building ‘summ.Rmd’ using rmarkdown
    Loading required package: Matrix
    Loading required namespace: broom.mixed
    dyld: lazy symbol binding failed: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    dyld: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    Error: processing vignette 'summ.Rmd' failed with diagnostics:
    pandoc document conversion failed with error 6
    --- failed re-building ‘summ.Rmd’
    
    --- re-building ‘svycor.Rmd’ using rmarkdown
    Loading required package: grid
    Loading required package: Matrix
    Loading required package: survival
    
    Attaching package: 'survey'
    
    The following object is masked from 'package:graphics':
    
     dotchart
    
    dyld: lazy symbol binding failed: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    dyld: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    Error: processing vignette 'svycor.Rmd' failed with diagnostics:
    pandoc document conversion failed with error 6
    --- failed re-building ‘svycor.Rmd’
    
    SUMMARY: processing the following files failed:
     ‘effect_plot.Rmd’ ‘summ.Rmd’ ‘svycor.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-osx-x86_64

Version: 2.0.3
Check: tests
Result: ERROR
     Running ‘testthat.R’ [60s/67s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(jtools)
     >
     >
     > test_check("jtools")
     ── 1. Error: plot_coefs works with brms (@test-export-summs.R#294) ────────────
     Aesthetics must be either length 1 or the same as the data (8): xmin and xmax
     Backtrace:
     1. testthat::expect_silent(print(plot_coefs(bfit1) + ggtitle("basic brms fit")))
     10. ggplot2:::print.ggplot(plot_coefs(bfit1) + ggtitle("basic brms fit"))
     12. ggplot2:::ggplot_build.ggplot(x)
     13. ggplot2:::by_layer(function(l, d) l$compute_aesthetics(d, plot))
     14. ggplot2:::f(l = layers[[i]], d = data[[i]])
     15. l$compute_aesthetics(d, plot)
     16. ggplot2:::f(..., self = self)
     17. ggplot2:::check_aesthetics(evaled, n)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 357 | SKIPPED: 0 | WARNINGS: 11 | FAILED: 1 ]
     1. Error: plot_coefs works with brms (@test-export-summs.R#294)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-release-linux-x86_64

Version: 2.0.3
Check: for missing documentation entries
Result: WARN
    Undocumented code objects:
     'tidy.glht' 'tidy.summary.glht'
    All user-level objects in a package should have documentation entries.
    See chapter 'Writing R documentation files' in the 'Writing R
    Extensions' manual.
Flavors: r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64