CRAN Package Check Results for Package ggeffects

Last updated on 2024-04-15 11:56:23 CEST.

Flavor	Version	T_install	T_check	T_total	Status
r-devel-linux-x86_64-debian-clang	1.5.1	14.13	251.44	265.57	OK
r-devel-linux-x86_64-debian-gcc	1.5.1	10.18	221.42	231.60	ERROR
r-devel-linux-x86_64-fedora-clang	1.5.1			344.82	ERROR
r-devel-linux-x86_64-fedora-gcc	1.5.1			371.28	ERROR
r-prerel-macos-arm64	1.5.1			51.00	OK
r-prerel-macos-x86_64	1.5.1			133.00	OK
r-prerel-windows-x86_64	1.5.1	13.00	230.00	243.00	OK
r-patched-linux-x86_64	1.5.1	12.14	270.75	282.89	OK
r-release-linux-x86_64	1.5.1	12.20	271.34	283.54	NOTE
r-release-macos-arm64	1.5.1			78.00	OK
r-release-macos-x86_64	1.5.1			168.00	OK
r-release-windows-x86_64	1.5.1	17.00	290.00	307.00	ERROR
r-oldrel-macos-arm64	1.5.1			55.00	OK
r-oldrel-windows-x86_64	1.5.1	17.00	273.00	290.00	OK

Check Details

Version: 1.5.1
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘margins’ Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-release-linux-x86_64

Version: 1.5.1
Check: tests
Result: ERROR Running ‘testthat.R’ [141s/206s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(ggeffects) > test_check("ggeffects") (Intercept) tensionM tensionH 36.38889 -10.00000 -14.72222 Not all rows are shown in the output. Use `print(..., n = Inf)` to show all rows. Not all rows are shown in the output. Use `print(..., n = Inf)` to show all rows. NOTE: Results may be misleading due to involvement in interactions NOTE: Results may be misleading due to involvement in interactions Data points may overlap. Use the `jitter` argument to add some amount of random variation to the location of data points and avoid overplotting. Data points may overlap. Use the `jitter` argument to add some amount of random variation to the location of data points and avoid overplotting. Data points may overlap. Use the `jitter` argument to add some amount of random variation to the location of data points and avoid overplotting. Data points may overlap. Use the `jitter` argument to add some amount of random variation to the location of data points and avoid overplotting. Re-fitting to get Hessian Re-fitting to get Hessian Model contains splines or polynomial terms. Consider using `terms="mined [all]"` to get smooth plots. See also package-vignette 'Adjusted Predictions at Specific Values'. Model contains splines or polynomial terms. Consider using `terms="cover [all]"` to get smooth plots. See also package-vignette 'Adjusted Predictions at Specific Values'. Model contains splines or polynomial terms. Consider using `terms="mined [all]"` to get smooth plots. See also package-vignette 'Adjusted Predictions at Specific Values'. Model contains splines or polynomial terms. Consider using `terms="cover [all]"` to get smooth plots. See also package-vignette 'Adjusted Predictions at Specific Values'. Can't compute adjusted predictions, `effects::Effect()` returned an error. Reason: Invalid operation on a survival time You may try `ggpredict()` or `ggemmeans()`. Can't compute adjusted predictions, `effects::Effect()` returned an error. Reason: non-conformable arguments You may try `ggpredict()` or `ggemmeans()`. [ FAIL 1 | WARN 16 | SKIP 48 | PASS 556 ] ══ Skipped tests (48) ══════════════════════════════════════════════════════════ • On CRAN (40): 'test-MCMCglmm.R:1:1', 'test-MixMod.R:1:1', 'test-avg_predictions.R:24:3', 'test-avg_predictions.R:79:5', 'test-brms-categ-cum.R:1:1', 'test-brms-ppd.R:1:1', 'test-brms-trial.R:1:1', 'test-clean_vars.R:1:1', 'test-clm.R:1:1', 'test-clm2.R:1:1', 'test-clmm.R:1:1', 'test-correct_se_sorting.R:1:1', 'test-decimals.R:1:1', 'test-fixest.R:1:1', 'test-format.R:1:1', 'test-gamlss.R:1:1', 'test-gamm4.R:1:1', 'test-glmer.R:2:1', 'test-glmmTMB.R:1:1', 'test-interval_re.R:1:1', 'test-ivreg.R:1:1', 'test-johnson_neyman_numcat.R:1:1', 'test-list_terms.R:36:3', 'test-lmer.R:1:1', 'test-mgcv.R:1:1', 'test-polr.R:21:7', 'test-polr.R:60:7', 'test-pool_comparisons.R:1:1', 'test-print.R:1:1', 'test-print_digits.R:1:1', 'test-print_md.R:1:1', 'test-resid_over_grid.R:33:5', 'test-rstanarm-ppd.R:1:1', 'test-rstanarm.R:1:1', 'test-sdmTMB.R:1:1', 'test-simulate.R:1:1', 'test-vcov.R:1:1', 'test-vglm.R:1:1', 'test-zeroinfl.R:27:3', 'test-zi_prob.R:1:1' • On Linux (5): 'test-ordinal.R:1:1', 'test-parsnip.R:94:3', 'test-print_subsets.R:1:1', 'test-print_test_predictions-ordinal.R:1:1', 'test-print_test_predictions.R:1:1' • empty test (3): 'test-plot.R:11:1', 'test-polr.R:136:5', 'test-polr.R:142:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-test_predictions.R:289:3'): test_predictions, works with glmmTMB and w/o vcov ── Error: For this model type, `vcov` must be `TRUE` or `FALSE`. Backtrace: ▆ 1. ├─ggeffects::test_predictions(predictions, vcov = vcov(m_null)$cond) at test-test_predictions.R:289:3 2. └─ggeffects:::test_predictions.ggeffects(predictions, vcov = vcov(m_null)$cond) 3. ├─base::do.call(test_predictions.default, c(my_args, dot_args)) 4. └─ggeffects (local) `<fn>`(...) 5. ├─base::do.call(...) 6. └─marginaleffects (local) `<fn>`(...) 7. └─marginaleffects::predictions(...) 8. └─marginaleffects:::sanitize_model(...) 9. ├─marginaleffects:::sanitize_model_specific(...) 10. └─marginaleffects:::sanitize_model_specific.glmmTMB(...) 11. └─insight::format_error(msg) 12. └─insight::format_alert(..., type = "error") [ FAIL 1 | WARN 16 | SKIP 48 | PASS 556 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.5.1
Check: tests
Result: ERROR Running ‘testthat.R’ [188s/193s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(ggeffects) > test_check("ggeffects") (Intercept) tensionM tensionH 36.38889 -10.00000 -14.72222 Not all rows are shown in the output. Use `print(..., n = Inf)` to show all rows. Not all rows are shown in the output. Use `print(..., n = Inf)` to show all rows. NOTE: Results may be misleading due to involvement in interactions NOTE: Results may be misleading due to involvement in interactions Data points may overlap. Use the `jitter` argument to add some amount of random variation to the location of data points and avoid overplotting. Data points may overlap. Use the `jitter` argument to add some amount of random variation to the location of data points and avoid overplotting. Data points may overlap. Use the `jitter` argument to add some amount of random variation to the location of data points and avoid overplotting. Data points may overlap. Use the `jitter` argument to add some amount of random variation to the location of data points and avoid overplotting. Re-fitting to get Hessian Re-fitting to get Hessian Model contains splines or polynomial terms. Consider using `terms="mined [all]"` to get smooth plots. See also package-vignette 'Adjusted Predictions at Specific Values'. Model contains splines or polynomial terms. Consider using `terms="cover [all]"` to get smooth plots. See also package-vignette 'Adjusted Predictions at Specific Values'. Model contains splines or polynomial terms. Consider using `terms="mined [all]"` to get smooth plots. See also package-vignette 'Adjusted Predictions at Specific Values'. Model contains splines or polynomial terms. Consider using `terms="cover [all]"` to get smooth plots. See also package-vignette 'Adjusted Predictions at Specific Values'. Can't compute adjusted predictions, `effects::Effect()` returned an error. Reason: Invalid operation on a survival time You may try `ggpredict()` or `ggemmeans()`. Can't compute adjusted predictions, `effects::Effect()` returned an error. Reason: non-conformable arguments You may try `ggpredict()` or `ggemmeans()`. [ FAIL 1 | WARN 16 | SKIP 48 | PASS 556 ] ══ Skipped tests (48) ══════════════════════════════════════════════════════════ • On CRAN (40): 'test-MCMCglmm.R:1:1', 'test-MixMod.R:1:1', 'test-avg_predictions.R:24:3', 'test-avg_predictions.R:79:5', 'test-brms-categ-cum.R:1:1', 'test-brms-ppd.R:1:1', 'test-brms-trial.R:1:1', 'test-clean_vars.R:1:1', 'test-clm.R:1:1', 'test-clm2.R:1:1', 'test-clmm.R:1:1', 'test-correct_se_sorting.R:1:1', 'test-decimals.R:1:1', 'test-fixest.R:1:1', 'test-format.R:1:1', 'test-gamlss.R:1:1', 'test-gamm4.R:1:1', 'test-glmer.R:2:1', 'test-glmmTMB.R:1:1', 'test-interval_re.R:1:1', 'test-ivreg.R:1:1', 'test-johnson_neyman_numcat.R:1:1', 'test-list_terms.R:36:3', 'test-lmer.R:1:1', 'test-mgcv.R:1:1', 'test-polr.R:21:7', 'test-polr.R:60:7', 'test-pool_comparisons.R:1:1', 'test-print.R:1:1', 'test-print_digits.R:1:1', 'test-print_md.R:1:1', 'test-resid_over_grid.R:33:5', 'test-rstanarm-ppd.R:1:1', 'test-rstanarm.R:1:1', 'test-sdmTMB.R:1:1', 'test-simulate.R:1:1', 'test-vcov.R:1:1', 'test-vglm.R:1:1', 'test-zeroinfl.R:27:3', 'test-zi_prob.R:1:1' • On Linux (5): 'test-ordinal.R:1:1', 'test-parsnip.R:94:3', 'test-print_subsets.R:1:1', 'test-print_test_predictions-ordinal.R:1:1', 'test-print_test_predictions.R:1:1' • empty test (3): 'test-plot.R:11:1', 'test-polr.R:136:5', 'test-polr.R:142:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-test_predictions.R:289:3'): test_predictions, works with glmmTMB and w/o vcov ── Error: For this model type, `vcov` must be `TRUE` or `FALSE`. Backtrace: ▆ 1. ├─ggeffects::test_predictions(predictions, vcov = vcov(m_null)$cond) at test-test_predictions.R:289:3 2. └─ggeffects:::test_predictions.ggeffects(predictions, vcov = vcov(m_null)$cond) 3. ├─base::do.call(test_predictions.default, c(my_args, dot_args)) 4. └─ggeffects (local) `<fn>`(...) 5. ├─base::do.call(...) 6. └─marginaleffects (local) `<fn>`(...) 7. └─marginaleffects::predictions(...) 8. └─marginaleffects:::sanitize_model(...) 9. ├─marginaleffects:::sanitize_model_specific(...) 10. └─marginaleffects:::sanitize_model_specific.glmmTMB(...) 11. └─insight::format_error(msg) 12. └─insight::format_alert(..., type = "error") [ FAIL 1 | WARN 16 | SKIP 48 | PASS 556 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.5.1
Check: tests
Result: ERROR Running ‘testthat.R’ [3m/11m] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(ggeffects) > test_check("ggeffects") (Intercept) tensionM tensionH 36.38889 -10.00000 -14.72222 Not all rows are shown in the output. Use `print(..., n = Inf)` to show all rows. Not all rows are shown in the output. Use `print(..., n = Inf)` to show all rows. NOTE: Results may be misleading due to involvement in interactions NOTE: Results may be misleading due to involvement in interactions Data points may overlap. Use the `jitter` argument to add some amount of random variation to the location of data points and avoid overplotting. Data points may overlap. Use the `jitter` argument to add some amount of random variation to the location of data points and avoid overplotting. Data points may overlap. Use the `jitter` argument to add some amount of random variation to the location of data points and avoid overplotting. Data points may overlap. Use the `jitter` argument to add some amount of random variation to the location of data points and avoid overplotting. Re-fitting to get Hessian Re-fitting to get Hessian Model contains splines or polynomial terms. Consider using `terms="mined [all]"` to get smooth plots. See also package-vignette 'Adjusted Predictions at Specific Values'. Model contains splines or polynomial terms. Consider using `terms="cover [all]"` to get smooth plots. See also package-vignette 'Adjusted Predictions at Specific Values'. Model contains splines or polynomial terms. Consider using `terms="mined [all]"` to get smooth plots. See also package-vignette 'Adjusted Predictions at Specific Values'. Model contains splines or polynomial terms. Consider using `terms="cover [all]"` to get smooth plots. See also package-vignette 'Adjusted Predictions at Specific Values'. Can't compute adjusted predictions, `effects::Effect()` returned an error. Reason: Invalid operation on a survival time You may try `ggpredict()` or `ggemmeans()`. Can't compute adjusted predictions, `effects::Effect()` returned an error. Reason: non-conformable arguments You may try `ggpredict()` or `ggemmeans()`. [ FAIL 1 | WARN 16 | SKIP 48 | PASS 556 ] ══ Skipped tests (48) ══════════════════════════════════════════════════════════ • On CRAN (40): 'test-MCMCglmm.R:1:1', 'test-MixMod.R:1:1', 'test-avg_predictions.R:24:3', 'test-avg_predictions.R:79:5', 'test-brms-categ-cum.R:1:1', 'test-brms-ppd.R:1:1', 'test-brms-trial.R:1:1', 'test-clean_vars.R:1:1', 'test-clm.R:1:1', 'test-clm2.R:1:1', 'test-clmm.R:1:1', 'test-correct_se_sorting.R:1:1', 'test-decimals.R:1:1', 'test-fixest.R:1:1', 'test-format.R:1:1', 'test-gamlss.R:1:1', 'test-gamm4.R:1:1', 'test-glmer.R:2:1', 'test-glmmTMB.R:1:1', 'test-interval_re.R:1:1', 'test-ivreg.R:1:1', 'test-johnson_neyman_numcat.R:1:1', 'test-list_terms.R:36:3', 'test-lmer.R:1:1', 'test-mgcv.R:1:1', 'test-polr.R:21:7', 'test-polr.R:60:7', 'test-pool_comparisons.R:1:1', 'test-print.R:1:1', 'test-print_digits.R:1:1', 'test-print_md.R:1:1', 'test-resid_over_grid.R:33:5', 'test-rstanarm-ppd.R:1:1', 'test-rstanarm.R:1:1', 'test-sdmTMB.R:1:1', 'test-simulate.R:1:1', 'test-vcov.R:1:1', 'test-vglm.R:1:1', 'test-zeroinfl.R:27:3', 'test-zi_prob.R:1:1' • On Linux (5): 'test-ordinal.R:1:1', 'test-parsnip.R:94:3', 'test-print_subsets.R:1:1', 'test-print_test_predictions-ordinal.R:1:1', 'test-print_test_predictions.R:1:1' • empty test (3): 'test-plot.R:11:1', 'test-polr.R:136:5', 'test-polr.R:142:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-test_predictions.R:289:3'): test_predictions, works with glmmTMB and w/o vcov ── Error: For this model type, `vcov` must be `TRUE` or `FALSE`. Backtrace: ▆ 1. ├─ggeffects::test_predictions(predictions, vcov = vcov(m_null)$cond) at test-test_predictions.R:289:3 2. └─ggeffects:::test_predictions.ggeffects(predictions, vcov = vcov(m_null)$cond) 3. ├─base::do.call(test_predictions.default, c(my_args, dot_args)) 4. └─ggeffects (local) `<fn>`(...) 5. ├─base::do.call(...) 6. └─marginaleffects (local) `<fn>`(...) 7. └─marginaleffects::predictions(...) 8. └─marginaleffects:::sanitize_model(...) 9. ├─marginaleffects:::sanitize_model_specific(...) 10. └─marginaleffects:::sanitize_model_specific.glmmTMB(...) 11. └─insight::format_error(msg) 12. └─insight::format_alert(..., type = "error") [ FAIL 1 | WARN 16 | SKIP 48 | PASS 556 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 1.5.1
Check: tests
Result: ERROR Running 'testthat.R' [170s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(ggeffects) > test_check("ggeffects") (Intercept) tensionM tensionH 36.38889 -10.00000 -14.72222 Not all rows are shown in the output. Use `print(..., n = Inf)` to show all rows. Not all rows are shown in the output. Use `print(..., n = Inf)` to show all rows. NOTE: Results may be misleading due to involvement in interactions NOTE: Results may be misleading due to involvement in interactions # weights: 16 (9 variable) initial value 1149.238025 iter 10 value 1015.404427 final value 1013.443395 converged Re-fitting to get Hessian Data points may overlap. Use the `jitter` argument to add some amount of random variation to the location of data points and avoid overplotting. Data points may overlap. Use the `jitter` argument to add some amount of random variation to the location of data points and avoid overplotting. Data points may overlap. Use the `jitter` argument to add some amount of random variation to the location of data points and avoid overplotting. Data points may overlap. Use the `jitter` argument to add some amount of random variation to the location of data points and avoid overplotting. Re-fitting to get Hessian Re-fitting to get Hessian Model contains splines or polynomial terms. Consider using `terms="mined [all]"` to get smooth plots. See also package-vignette 'Adjusted Predictions at Specific Values'. Model contains splines or polynomial terms. Consider using `terms="cover [all]"` to get smooth plots. See also package-vignette 'Adjusted Predictions at Specific Values'. Model contains splines or polynomial terms. Consider using `terms="mined [all]"` to get smooth plots. See also package-vignette 'Adjusted Predictions at Specific Values'. Model contains splines or polynomial terms. Consider using `terms="cover [all]"` to get smooth plots. See also package-vignette 'Adjusted Predictions at Specific Values'. Can't compute adjusted predictions, `effects::Effect()` returned an error. Reason: Invalid operation on a survival time You may try `ggpredict()` or `ggemmeans()`. Can't compute adjusted predictions, `effects::Effect()` returned an error. Reason: non-conformable arguments You may try `ggpredict()` or `ggemmeans()`. [ FAIL 2 | WARN 17 | SKIP 62 | PASS 572 ] ══ Skipped tests (62) ══════════════════════════════════════════════════════════ • On CRAN (59): 'test-MCMCglmm.R:1:1', 'test-MixMod.R:1:1', 'test-avg_predictions.R:24:3', 'test-avg_predictions.R:79:5', 'test-brms-categ-cum.R:1:1', 'test-brms-ppd.R:1:1', 'test-brms-trial.R:1:1', 'test-clean_vars.R:1:1', 'test-clm.R:1:1', 'test-clm2.R:1:1', 'test-clmm.R:1:1', 'test-correct_se_sorting.R:1:1', 'test-decimals.R:1:1', 'test-fixest.R:1:1', 'test-format.R:1:1', 'test-gamlss.R:1:1', 'test-gamm4.R:1:1', 'test-glmer.R:2:1', 'test-glmmTMB.R:1:1', 'test-interval_re.R:1:1', 'test-ivreg.R:1:1', 'test-johnson_neyman_numcat.R:1:1', 'test-list_terms.R:36:3', 'test-lmer.R:1:1', 'test-mgcv.R:1:1', 'test-polr.R:21:7', 'test-polr.R:60:7', 'test-pool_comparisons.R:1:1', 'test-print.R:1:1', 'test-print_digits.R:1:1', 'test-print_md.R:1:1', 'test-print_subsets.R:6:3', 'test-print_subsets.R:11:3', 'test-print_test_predictions-ordinal.R:14:3', 'test-print_test_predictions.R:20:3', 'test-print_test_predictions.R:24:3', 'test-print_test_predictions.R:28:3', 'test-print_test_predictions.R:32:3', 'test-print_test_predictions.R:36:3', 'test-print_test_predictions.R:40:3', 'test-print_test_predictions.R:44:3', 'test-print_test_predictions.R:49:3', 'test-print_test_predictions.R:53:3', 'test-print_test_predictions.R:57:3', 'test-print_test_predictions.R:61:3', 'test-print_test_predictions.R:65:3', 'test-print_test_predictions.R:172:3', 'test-print_test_predictions.R:231:3', 'test-print_test_predictions.R:240:3', 'test-print_test_predictions.R:249:3', 'test-resid_over_grid.R:33:5', 'test-rstanarm-ppd.R:1:1', 'test-rstanarm.R:1:1', 'test-sdmTMB.R:1:1', 'test-simulate.R:1:1', 'test-vcov.R:1:1', 'test-vglm.R:1:1', 'test-zeroinfl.R:27:3', 'test-zi_prob.R:1:1' • empty test (3): 'test-plot.R:11:1', 'test-polr.R:136:5', 'test-polr.R:142:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-print_test_predictions.R:265:3'): glmmTMB, orderedbeta ───────── Error: For this model type, `vcov` must be `TRUE` or `FALSE`. Backtrace: ▆ 1. └─ggeffects::predict_response(m, "gear", margin = "ame") at test-print_test_predictions.R:265:3 2. └─ggeffects::ggaverage(...) 3. └─marginaleffects::avg_predictions(...) 4. └─marginaleffects::predictions(...) 5. └─marginaleffects:::sanitize_model(...) 6. ├─marginaleffects:::sanitize_model_specific(...) 7. └─marginaleffects:::sanitize_model_specific.glmmTMB(...) 8. └─insight::format_error(msg) 9. └─insight::format_alert(..., type = "error") ── Error ('test-test_predictions.R:289:3'): test_predictions, works with glmmTMB and w/o vcov ── Error: For this model type, `vcov` must be `TRUE` or `FALSE`. Backtrace: ▆ 1. ├─ggeffects::test_predictions(predictions, vcov = vcov(m_null)$cond) at test-test_predictions.R:289:3 2. └─ggeffects:::test_predictions.ggeffects(predictions, vcov = vcov(m_null)$cond) 3. ├─base::do.call(test_predictions.default, c(my_args, dot_args)) 4. └─ggeffects (local) `<fn>`(...) 5. ├─base::do.call(...) 6. └─marginaleffects (local) `<fn>`(...) 7. └─marginaleffects::predictions(...) 8. └─marginaleffects:::sanitize_model(...) 9. ├─marginaleffects:::sanitize_model_specific(...) 10. └─marginaleffects:::sanitize_model_specific.glmmTMB(...) 11. └─insight::format_error(msg) 12. └─insight::format_alert(..., type = "error") [ FAIL 2 | WARN 17 | SKIP 62 | PASS 572 ] Error: Test failures Execution halted Flavor: r-release-windows-x86_64