CRAN Package Check Results for Maintainer ‘Gert van Valkenhoef <gert at gertvv.nl>’

Last updated on 2024-05-17 05:57:11 CEST.

Package ERROR NOTE OK
gemtc 1 8 3
hitandrun 12
smaa 12

Package gemtc

Current CRAN status: ERROR: 1, NOTE: 8, OK: 3

Version: 1.0-2
Check: Rd files
Result: NOTE checkRd: (-1) parkinson.Rd:9: Lost braces in \itemize; meant \describe ? checkRd: (-1) parkinson.Rd:10: Lost braces in \itemize; meant \describe ? checkRd: (-1) parkinson.Rd:11: Lost braces in \itemize; meant \describe ? Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-windows-x86_64

Version: 1.0-2
Check: examples
Result: ERROR Running examples in ‘gemtc-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: gemtc-package > ### Title: GeMTC: Network meta-analysis in R > ### Aliases: mtc gemtc gemtc-package > > ### ** Examples > > # Load the example network and generate a consistency model: > model <- mtc.model(smoking, type="consistency") > > # Load pre-generated samples instead of runing the model: > ## Not run: results <- mtc.run(model, thin=10) > results <- readRDS(system.file("extdata/luades-smoking-samples.rds", package="gemtc")) Error in readRDS(system.file("extdata/luades-smoking-samples.rds", package = "gemtc")) : 'parent' is not an environment Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.0-2
Check: tests
Result: ERROR Running ‘test.R’ [33s/49s] Running the tests in ‘tests/test.R’ failed. Complete output: > library(testthat) > test_check('gemtc', filter="unit") Loading required package: gemtc Loading required package: coda [ FAIL 9 | WARN 8 | SKIP 0 | PASS 350 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-unit-relative.effect.R:4:3'): relative.effect outputs the correct parameters ── Error in `readRDS(system.file("extdata/luades-smoking-samples.rds", package = "gemtc"))`: 'parent' is not an environment Backtrace: ▆ 1. └─base::readRDS(...) at test-unit-relative.effect.R:4:3 ── Error ('test-unit-relative.effect.R:28:3'): relative.effect generates the expected statistics ── Error in `readRDS(system.file("extdata/luades-smoking-samples.rds", package = "gemtc"))`: 'parent' is not an environment Backtrace: ▆ 1. └─base::readRDS(...) at test-unit-relative.effect.R:28:3 ── Error ('test-unit-relative.effect.R:78:3'): relative.effect can be applied recursively ── Error in `readRDS(system.file("extdata/luades-smoking-samples.rds", package = "gemtc"))`: 'parent' is not an environment Backtrace: ▆ 1. └─base::readRDS(...) at test-unit-relative.effect.R:78:3 ── Error ('test-unit-relative.effect.R:102:3'): rank.probability returns the right results ── Error in `readRDS(system.file("extdata/luades-smoking-samples.rds", package = "gemtc"))`: 'parent' is not an environment Backtrace: ▆ 1. └─base::readRDS(...) at test-unit-relative.effect.R:102:3 ── Error ('test-unit-relative.effect.R:107:3'): rank.probability can be applied to a subset of parameters ── Error in `readRDS(system.file("extdata/luades-smoking-samples.rds", package = "gemtc"))`: 'parent' is not an environment Backtrace: ▆ 1. └─base::readRDS(...) at test-unit-relative.effect.R:107:3 ── Error ('test-unit-relative.effect.R:121:3'): spanning.tree.mtc.result handles two-treatment case ── Error in `readRDS(system.file("extdata/luades-smoking-samples.rds", package = "gemtc"))`: 'parent' is not an environment Backtrace: ▆ 1. └─base::readRDS(...) at test-unit-relative.effect.R:121:3 ── Error ('test-unit-relative.effect.R:134:3'): relative.effect is robust to missing sd.d ── Error in `readRDS(system.file("extdata/luades-smoking-samples.rds", package = "gemtc"))`: 'parent' is not an environment Backtrace: ▆ 1. └─base::readRDS(...) at test-unit-relative.effect.R:134:3 ── Error ('test-unit-relative.effect.R:144:3'): relative.effect is robust to leading columns ── Error in `readRDS(system.file("extdata/luades-smoking-samples.rds", package = "gemtc"))`: 'parent' is not an environment Backtrace: ▆ 1. └─base::readRDS(...) at test-unit-relative.effect.R:144:3 ── Error ('test-unit-relative.effect.table.R:4:3'): it works for the smoking example ── Error in `readRDS(system.file("extdata/luades-smoking-samples.rds", package = "gemtc"))`: 'parent' is not an environment Backtrace: ▆ 1. └─base::readRDS(...) at test-unit-relative.effect.table.R:4:3 [ FAIL 9 | WARN 8 | SKIP 0 | PASS 350 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Package hitandrun

Current CRAN status: OK: 12

Package smaa

Current CRAN status: OK: 12