Last updated on 2024-07-04 11:50:04 CEST.
| Package | ERROR | OK |
|---|---|---|
| CodelistGenerator | 13 | |
| CohortConstructor | 13 | |
| CohortSurvival | 13 | |
| IncidencePrevalence | 2 | 11 |
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: ERROR: 2, OK: 11
Version: 0.7.4
Check: running R code from vignettes
Result: ERROR
Errors in running code in vignettes:
when running code in ‘a02_Creating_denominator_populations.Rmd’
...
> library(knitr)
> library(here)
here() starts at /private/var/folders/k4/0jwzxmln0nb8y6rkzprptb640000gq/T/Rtmpk31fx0/filebc8f67faa415/vignettes
> knitr::include_graphics(here("vignettes/dpop1.png"))
When sourcing ‘a02_Creating_denominator_populations.R’:
Error: Cannot find the file(s): "/private/var/folders/k4/0jwzxmln0nb8y6rkzprptb640000gq/T/Rtmpk31fx0/filebc8f67faa415/vignettes/vignettes/dpop1.png"
Execution halted
when running code in ‘a04_Calculating_prevalence.Rmd’
...
+ "macOS")
> library(here)
here() starts at /private/var/folders/k4/0jwzxmln0nb8y6rkzprptb640000gq/T/Rtmpyp4MMd/filed0fb15ea0b85/vignettes
> knitr::include_graphics(here("vignettes/point_prev.png"))
When sourcing ‘a04_Calculating_prevalence.R’:
Error: Cannot find the file(s): "/private/var/folders/k4/0jwzxmln0nb8y6rkzprptb640000gq/T/Rtmpyp4MMd/filed0fb15ea0b85/vignettes/vignettes/point_prev.png"
Execution halted
when running code in ‘a05_Calculating_incidence.Rmd’
...
+ "macOS")
> library(here)
here() starts at /private/var/folders/k4/0jwzxmln0nb8y6rkzprptb640000gq/T/RtmpMzBsAo/filed13a32e3ce61/vignettes
> knitr::include_graphics(here("vignettes/inc_no_rep_no_washout.png"))
When sourcing ‘a05_Calculating_incidence.R’:
Error: Cannot find the file(s): "/private/var/folders/k4/0jwzxmln0nb8y6rkzprptb640000gq/T/RtmpMzBsAo/filed13a32e3ce61/vignettes/vignettes/inc_no_rep_no_washout.png"
Execution halted
‘a01_Introduction_to_IncidencePrevalence.Rmd’ using ‘UTF-8’... [23s/34s] OK
‘a02_Creating_denominator_populations.Rmd’ using ‘UTF-8’... failed
‘a03_Creating_target_denominator_populations.Rmd’ using ‘UTF-8’... [13s/22s] OK
‘a04_Calculating_prevalence.Rmd’ using ‘UTF-8’... failed
‘a05_Calculating_incidence.Rmd’ using ‘UTF-8’... failed
‘a06_Plotting_options.Rmd’ using ‘UTF-8’... [11s/22s] OK
Flavor: r-oldrel-macos-arm64
Version: 0.7.4
Check: running R code from vignettes
Result: ERROR
Errors in running code in vignettes:
when running code in ‘a02_Creating_denominator_populations.Rmd’
...
> library(knitr)
> library(here)
here() starts at /private/var/folders/2b/t0kwbtmn3p7brv2mvx39c9cr0000gn/T/RtmprkLG7p/file175157e3badae/vignettes
> knitr::include_graphics(here("vignettes/dpop1.png"))
When sourcing ‘a02_Creating_denominator_populations.R’:
Error: Cannot find the file(s): "/private/var/folders/2b/t0kwbtmn3p7brv2mvx39c9cr0000gn/T/RtmprkLG7p/file175157e3badae/vignettes/vignettes/dpop1.png"
Execution halted
when running code in ‘a04_Calculating_prevalence.Rmd’
...
+ "macOS")
> library(here)
here() starts at /private/var/folders/2b/t0kwbtmn3p7brv2mvx39c9cr0000gn/T/RtmplAhYfv/filec27179aaabf/vignettes
> knitr::include_graphics(here("vignettes/point_prev.png"))
When sourcing ‘a04_Calculating_prevalence.R’:
Error: Cannot find the file(s): "/private/var/folders/2b/t0kwbtmn3p7brv2mvx39c9cr0000gn/T/RtmplAhYfv/filec27179aaabf/vignettes/vignettes/point_prev.png"
Execution halted
when running code in ‘a05_Calculating_incidence.Rmd’
...
+ "macOS")
> library(here)
here() starts at /private/var/folders/2b/t0kwbtmn3p7brv2mvx39c9cr0000gn/T/Rtmp5H4B4Y/filec2e67504206/vignettes
> knitr::include_graphics(here("vignettes/inc_no_rep_no_washout.png"))
When sourcing ‘a05_Calculating_incidence.R’:
Error: Cannot find the file(s): "/private/var/folders/2b/t0kwbtmn3p7brv2mvx39c9cr0000gn/T/Rtmp5H4B4Y/filec2e67504206/vignettes/vignettes/inc_no_rep_no_washout.png"
Execution halted
‘a01_Introduction_to_IncidencePrevalence.Rmd’ using ‘UTF-8’... [39s/70s] OK
‘a02_Creating_denominator_populations.Rmd’ using ‘UTF-8’... failed
‘a03_Creating_target_denominator_populations.Rmd’ using ‘UTF-8’... [21s/31s] OK
‘a04_Calculating_prevalence.Rmd’ using ‘UTF-8’... failed
‘a05_Calculating_incidence.Rmd’ using ‘UTF-8’... failed
‘a06_Plotting_options.Rmd’ using ‘UTF-8’... [14s/14s] OK
Flavor: r-oldrel-macos-x86_64