CRAN Package Check Results for Package MetaIntegrator

Last updated on 2020-07-15 21:48:15 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.1.3 14.86 165.18 180.04 OK
r-devel-linux-x86_64-debian-gcc 2.1.3 12.84 146.42 159.26 OK
r-devel-linux-x86_64-fedora-clang 2.1.3 213.68 NOTE
r-devel-linux-x86_64-fedora-gcc 2.1.3 204.60 NOTE
r-devel-windows-ix86+x86_64 2.1.3 45.00 242.00 287.00 OK
r-patched-linux-x86_64 2.1.3 11.21 159.76 170.97 OK
r-patched-solaris-x86 2.1.3 261.00 NOTE
r-release-linux-x86_64 2.1.3 12.09 164.94 177.03 OK
r-release-windows-ix86+x86_64 2.1.3 45.00 231.00 276.00 OK
r-oldrel-macos-x86_64 2.1.3 WARN
r-oldrel-windows-ix86+x86_64 2.1.3 43.00 219.00 262.00 OK

Check Details

Version: 2.1.3
Check: package dependencies
Result: NOTE
    Imports includes 35 non-default packages.
    Importing from so many packages makes the package vulnerable to any of
    them becoming unavailable. Move as many as possible to Suggests and
    use conditionally.
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 2.1.3
Check: dependencies in R code
Result: NOTE
    Namespaces in Imports field not imported from:
     ‘BiocManager’ ‘DT’ ‘GEOmetadb’ ‘RMySQL’ ‘RSQLite’ ‘gplots’ ‘pheatmap’
     ‘readr’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-oldrel-macos-x86_64

Version: 2.1.3
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘BiocStyle’
Flavor: r-oldrel-macos-x86_64

Version: 2.1.3
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘MetaIntegrator.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Quitting from lines 29-30 (MetaIntegrator.Rmd)
    Error: processing vignette 'MetaIntegrator.Rmd' failed with diagnostics:
    there is no package called 'BiocStyle'
    --- failed re-building ‘MetaIntegrator.Rmd’
    
    --- re-building ‘MetaIntegratorRealExample.Rmd’ using rmarkdown_notangle
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    --- finished re-building ‘MetaIntegratorRealExample.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘MetaIntegrator.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-oldrel-macos-x86_64