Last updated on 2025-12-26 12:50:00 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.0 | 9.58 | 107.66 | 117.24 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.1.0 | 7.39 | 79.15 | 86.54 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.1.0 | 19.00 | 174.71 | 193.71 | NOTE | |
| r-devel-linux-x86_64-fedora-gcc | 0.1.0 | 19.00 | 194.64 | 213.64 | NOTE | |
| r-devel-windows-x86_64 | 0.1.0 | 12.00 | 101.00 | 113.00 | ERROR | |
| r-patched-linux-x86_64 | 0.1.0 | 9.92 | 98.87 | 108.79 | OK | |
| r-release-linux-x86_64 | 0.1.0 | 9.11 | 99.16 | 108.27 | OK | |
| r-release-macos-arm64 | 0.1.0 | OK | ||||
| r-release-macos-x86_64 | 0.1.0 | 6.00 | 123.00 | 129.00 | OK | |
| r-release-windows-x86_64 | 0.1.0 | 12.00 | 107.00 | 119.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.0 | OK | ||||
| r-oldrel-macos-x86_64 | 0.1.0 | 6.00 | 105.00 | 111.00 | OK | |
| r-oldrel-windows-x86_64 | 0.1.0 | 16.00 | 139.00 | 155.00 | OK |
Version: 0.1.0
Check: dependencies in R code
Result: NOTE
Namespaces in Imports field not imported from:
‘kableExtra’ ‘knitr’ ‘reshape2’ ‘tidyverse’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.1.0
Check: examples
Result: ERROR
Running examples in 'MEAanalysis-Ex.R' failed
The error most likely occurred in:
> ### Name: create_electrode_dataset
> ### Title: Create Electrode Data Set
> ### Aliases: create_electrode_dataset
>
> ### ** Examples
>
> output_electrode_burst <- create_electrode_dataset(
+ data_path = system.file("extdata", "input_electrode_burst.csv",
+ package = "MEAanalysis"),
+ recording_identifier = "burst_recording_1")
New names:
• `` -> `...7`
• `` -> `...8`
• `` -> `...9`
• `` -> `...10`
• `` -> `...11`
• `` -> `...12`
• `` -> `...13`
• `` -> `...14`
• `` -> `...15`
• `` -> `...16`
• `` -> `...17`
• `` -> `...18`
• `` -> `...19`
• `` -> `...20`
• `` -> `...21`
• `` -> `...22`
• `` -> `...23`
• `` -> `...24`
• `` -> `...25`
Error in `[.data.table`(data_1, , `:=`(Recording_identifier, recording_identifier), :
attempt access index 4/4 in VECTOR_ELT
Calls: create_electrode_dataset -> [ -> [.data.table
Execution halted
Flavor: r-devel-windows-x86_64
Version: 0.1.0
Check: tests
Result: ERROR
Running 'testthat.R' [5s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(MEAanalysis)
>
> test_check("MEAanalysis")
New names:
* `` -> `...7`
* `` -> `...8`
* `` -> `...9`
* `` -> `...10`
* `` -> `...11`
* `` -> `...12`
* `` -> `...13`
* `` -> `...14`
* `` -> `...15`
* `` -> `...16`
* `` -> `...17`
* `` -> `...18`
* `` -> `...19`
* `` -> `...20`
* `` -> `...21`
* `` -> `...22`
* `` -> `...23`
* `` -> `...24`
* `` -> `...25`
Saving _problems/test-create_electrode_dataset-4.R
New names:
* `` -> `...7`
* `` -> `...8`
* `` -> `...9`
* `` -> `...10`
* `` -> `...11`
* `` -> `...12`
* `` -> `...13`
* `` -> `...14`
* `` -> `...15`
* `` -> `...16`
* `` -> `...17`
* `` -> `...18`
* `` -> `...19`
* `` -> `...20`
* `` -> `...21`
* `` -> `...22`
* `` -> `...23`
* `` -> `...24`
* `` -> `...25`
Saving _problems/test-create_electrode_dataset-12.R
New names:
* `` -> `...7`
* `` -> `...8`
* `` -> `...9`
* `` -> `...10`
* `` -> `...11`
* `` -> `...12`
* `` -> `...13`
* `` -> `...14`
* `` -> `...15`
* `` -> `...16`
* `` -> `...17`
* `` -> `...18`
* `` -> `...19`
* `` -> `...20`
* `` -> `...21`
* `` -> `...22`
* `` -> `...23`
* `` -> `...24`
* `` -> `...25`
Saving _problems/test-create_electrode_dataset-31.R
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 11 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-create_electrode_dataset.R:4:3'): create_electrode_dataset output is a datatable ──
Error in ``[.data.table`(data_1, , `:=`(Recording_identifier, recording_identifier), by = Electrode)`: attempt access index 4/4 in VECTOR_ELT
Backtrace:
▆
1. └─MEAanalysis::create_electrode_dataset(...) at test-create_electrode_dataset.R:4:3
2. ├─data_1[, `:=`(Recording_identifier, recording_identifier), by = Electrode]
3. └─data.table:::`[.data.table`(...)
── Error ('test-create_electrode_dataset.R:12:3'): create_electrode_dataset column classes are correct ──
Error in ``[.data.table`(data_1, , `:=`(Recording_identifier, recording_identifier), by = Electrode)`: attempt access index 4/4 in VECTOR_ELT
Backtrace:
▆
1. └─MEAanalysis::create_electrode_dataset(...) at test-create_electrode_dataset.R:12:3
2. ├─data_1[, `:=`(Recording_identifier, recording_identifier), by = Electrode]
3. └─data.table:::`[.data.table`(...)
── Error ('test-create_electrode_dataset.R:31:3'): create_electrode_dataset output does not contain missing values ──
Error in ``[.data.table`(data_1, , `:=`(Recording_identifier, recording_identifier), by = Electrode)`: attempt access index 4/4 in VECTOR_ELT
Backtrace:
▆
1. └─MEAanalysis::create_electrode_dataset(...) at test-create_electrode_dataset.R:31:3
2. ├─data_1[, `:=`(Recording_identifier, recording_identifier), by = Electrode]
3. └─data.table:::`[.data.table`(...)
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 11 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-windows-x86_64
Version: 0.1.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'MEA_single_electrode_barchart.Rmd' using rmarkdown
Quitting from MEA_single_electrode_barchart.Rmd:46-54 [unnamed-chunk-3]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 4/4 in VECTOR_ELT
---
Backtrace:
▆
1. └─MEAanalysis::create_electrode_dataset(...)
2. ├─data_1[, `:=`(Recording_identifier, recording_identifier), by = Electrode]
3. └─data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'MEA_single_electrode_barchart.Rmd' failed with diagnostics:
attempt access index 4/4 in VECTOR_ELT
--- failed re-building 'MEA_single_electrode_barchart.Rmd'
--- re-building 'MEA_synchrony_index_heatmap.Rmd' using rmarkdown
--- finished re-building 'MEA_synchrony_index_heatmap.Rmd'
--- re-building 'MEA_well_barchart.Rmd' using rmarkdown
Quitting from MEA_well_barchart.Rmd:46-54 [unnamed-chunk-3]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 4/4 in VECTOR_ELT
---
Backtrace:
▆
1. └─MEAanalysis::create_electrode_dataset(...)
2. ├─data_1[, `:=`(Recording_identifier, recording_identifier), by = Electrode]
3. └─data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'MEA_well_barchart.Rmd' failed with diagnostics:
attempt access index 4/4 in VECTOR_ELT
--- failed re-building 'MEA_well_barchart.Rmd'
SUMMARY: processing the following files failed:
'MEA_single_electrode_barchart.Rmd' 'MEA_well_barchart.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-windows-x86_64