Last updated on 2024-04-18 06:09:41 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.1.9 | 24.36 | 96.90 | 121.26 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 2.1.9 | 19.22 | 68.90 | 88.12 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 2.1.9 | 146.91 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 2.1.9 | 158.73 | NOTE | |||
| r-prerel-macos-arm64 | 2.1.9 | 51.00 | NOTE | |||
| r-prerel-windows-x86_64 | 2.1.9 | 24.00 | 112.00 | 136.00 | NOTE | |
| r-patched-linux-x86_64 | 2.1.9 | 25.79 | 91.31 | 117.10 | NOTE | |
| r-release-linux-x86_64 | 2.1.9 | 24.47 | 89.36 | 113.83 | OK | |
| r-release-macos-arm64 | 2.1.9 | 48.00 | OK | |||
| r-release-macos-x86_64 | 2.1.9 | 183.00 | OK | |||
| r-release-windows-x86_64 | 2.1.9 | 32.00 | 121.00 | 153.00 | OK | |
| r-oldrel-macos-arm64 | 2.1.9 | 74.00 | OK | |||
| r-oldrel-windows-x86_64 | 2.1.9 | 30.00 | 121.00 | 151.00 | OK |
Version: 2.1.9
Check: Rd files
Result: NOTE
checkRd: (-1) getPathToAttractor.Rd:23: Lost braces; missing escapes or markup?
23 | Specifies whether the actual attractor states are included in the resulting table or not. If \code{includeAttractorStates = "all"} (which is the default behaviour), the sequence ends when the attractor was traversed once. If \code{includeAttractorStates = "first"}, only the first state of attractor is added to the sequence. This corresponds to the behaviour prior to \pkg{BoolNet} version 1.5. If {includeAttractorStates = "none"}, the sequence ends with the last non-attractor state. In this case, the sequence can be empty if the start state is an attractor state.
| ^
checkRd: (-1) plotSequence.Rd:42: Lost braces; missing escapes or markup?
42 | Specifies whether the actual attractor states are included in the plot or not (see also \code{\link{getPathToAttractor}}). If \code{includeAttractorStates = "all"} (which is the default behaviour), the sequence ends when the attractor was traversed once. If \code{includeAttractorStates = "first"}, only the first state of attractor is added to the sequence. If {includeAttractorStates = "none"}, the sequence ends with the last non-attractor state.
| ^
checkRd: (-1) sequenceToLaTeX.Rd:37: Lost braces; missing escapes or markup?
37 | Specifies whether the actual attractor states are included in the table or not (see also \code{\link{getPathToAttractor}}). If \code{includeAttractorStates = "all"} (which is the default behaviour), the sequence ends when the attractor was traversed once. If \code{includeAttractorStates = "first"}, only the first state of attractor is added to the sequence. If {includeAttractorStates = "none"}, the sequence ends with the last non-attractor state.
| ^
checkRd: (-1) simulateSymbolicModel.Rd:64: Lost braces in \itemize; meant \describe ?
checkRd: (-1) simulateSymbolicModel.Rd:66-70: Lost braces in \itemize; meant \describe ?
checkRd: (-1) simulateSymbolicModel.Rd:72-73: Lost braces in \itemize; meant \describe ?
checkRd: (-1) testNetworkProperties.Rd:131: Lost braces; missing escapes or markup?
131 | If {perturb="functions"} or \code{perturb="transitions"} and \code{accumulate=FALSE}, the function returns a vector of percentages of original attractors found in each of the perturbed copies of the original network. If \code{accumulate=TRUE}, the function returns the overall percentage of original attractors found in all perturbed copies.
| ^
checkRd: (-1) testNetworkProperties.Rd:140: Lost braces
140 | code{params} can hold parameters \code{numSamples, flipBits} corresponding to the parameters of \code{\link{perturbTrajectories}} that define how many initial states are drawn and how many bits are flipped.
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-prerel-macos-arm64, r-prerel-windows-x86_64, r-patched-linux-x86_64