* using log directory 'd:/Rcompile/CRANpkg/local/4.5/spatstat.linnet.Rcheck' * using R Under development (unstable) (2024-07-14 r86899 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'spatstat.linnet/DESCRIPTION' ... OK * this is package 'spatstat.linnet' version '3.1-5' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'spatstat.linnet' can be installed ... OK * used C compiler: 'gcc.exe (GCC) 13.2.0' * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [2s] OK * checking whether the package can be loaded with stated dependencies ... [2s] OK * checking whether the package can be unloaded cleanly ... [2s] OK * checking whether the namespace can be loaded with stated dependencies ... [2s] OK * checking whether the namespace can be unloaded cleanly ... [2s] OK * checking loading without being on the library search path ... [2s] OK * checking whether startup messages can be suppressed ... [2s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [25s] OK * checking Rd files ... [4s] OK * checking Rd metadata ... OK * checking Rd cross-references ... NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: Extract.lpp.Rd: unmark Replace.linim.Rd: as.ppp, [<-.im Smooth.lpp.Rd: Smooth affine.linnet.Rd: unitname<-, affine, shift, rotate, rescale, scalardilate affine.lpp.Rd: unitname<-, affine, shift, rotate, rescale, scalardilate as.linim.Rd: as.im as.linnet.psp.Rd: selfcut.psp auc.lpp.Rd: roc berman.test.lpp.Rd: plot.bermantest bw.lppl.Rd: bw.scott, bw.ppl cdf.test.lpp.Rd: ewcdf, plot.cdftest clickjoin.Rd: identify.ppp, clickppp clicklpp.Rd: clickppp, clickpoly, clickbox, clickdist crossdist.lpp.Rd: crossdist, crossdist.ppp, pairdist, nndist crossing.linnet.Rd: crossing.psp data.lppm.Rd: data.ppm delaunayNetwork.Rd: delaunay, dirichlet, delaunayDistance density.lpp.Rd: bw.scott.iso, dkernel densityEqualSplit.Rd: bw.scott.iso, dkernel densityHeat.lpp.Rd: bw.scott.iso, spatstat.options densityQuick.lpp.Rd: bw.scott.iso, bw.scott densityVoronoi.lpp.Rd: densityVoronoi diameter.linnet.Rd: boundingradius, diameter distfun.lpp.Rd: distfun distmap.lpp.Rd: distmap envelope.lpp.Rd: envelope eval.linim.Rd: eval.im fitted.lppm.Rd: ppm, dfbetas.ppm heatkernelapprox.Rd: hotrod integral.linim.Rd: integral.im intensity.lpp.Rd: intensity, intensity.ppp linearK.Rd: compileK linearKEuclidInhom.Rd: update.ppm, fitted.ppm linearKcross.Rd: Kcross, fv.object linearKcross.inhom.Rd: Kcross.inhom, fv.object linearKdot.Rd: Kdot, fv.object linearKdot.inhom.Rd: Kdot.inhom, fv.object linearKinhom.Rd: update.ppm, fitted.ppm linearmarkconnect.Rd: markconnect, fv.object linearmarkequal.Rd: fv.object, markconnect linearpcfEuclidInhom.Rd: update.ppm, fitted.ppm linearpcfcross.Rd: pcfcross, fv.object linearpcfcross.inhom.Rd: pcfcross.inhom, fv.object linearpcfdot.Rd: pcfdot, fv.object, pcfcross linearpcfdot.inhom.Rd: pcfdot.inhom, fv.object, pcfcross.inhom linearpcfinhom.Rd: update.ppm, fitted.ppm lineartileindex.Rd: tileindex linim.Rd: im lpp.Rd: as.ppp, methods.ppx lppm.Rd: ppm mean.linim.Rd: mean.im, quantile.im, quantilefun methods.linfun.Rd: plot.im, as.owin methods.linim.Rd: as.im, shift, scalardilate, affine methods.linnet.Rd: unitname, as.owin, as.psp, nsegments, nvertices, pixellate, unitname<-, vertices, volume, Window, pixellate.psp model.frame.lppm.Rd: quad.ppm nnfun.lpp.Rd: nnfun pairs.linim.Rd: pairs.im plot.linim.Rd: plot.im, dilation.owin, nearestValue plot.linnet.Rd: plot.psp, plot.ppp plot.lintess.Rd: plot.im, plot.colourmap plot.lpp.Rd: plot.ppp, plot.symbolmap, symbolmap points.lpp.Rd: plot.ppp rThomaslpp.Rd: rpoisppOnLines rcelllpp.Rd: rcellnumber relrisk.lpp.Rd: relrisk rpoislpp.Rd: rpoisppOnLines runiflpp.Rd: runifpointOnLines superimpose.lpp.Rd: superimpose Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking for GNU extensions in Makefiles ... OK * checking include directives in Makefiles ... OK * checking pragmas in C/C++ headers and code ... OK * checking compiled code ... OK * checking installed files from 'inst/doc' ... OK * checking examples ... [55s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [13s] OK Running 'testsAtoK.R' [3s] Running 'testsL.R' [8s] Running 'testsMtoZ.R' [2s] * checking PDF version of manual ... [33s] OK * checking HTML version of manual ... [37s] OK * DONE Status: 1 NOTE