* using log directory 'd:/Rcompile/CRANpkg/local/4.2/LMMsolver.Rcheck' * using R version 4.2.3 (2023-03-15 ucrt) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: UTF-8 * checking for file 'LMMsolver/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'LMMsolver' version '1.0.7' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'LMMsolver' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [8s] OK * checking Rd files ... [1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking pragmas in C/C++ headers and code ... OK * checking compiled code ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [7s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [7s] ERROR Running 'tinytest.R' [6s] Running the tests in 'tests/tinytest.R' failed. Complete output: > > if ( requireNamespace("tinytest", quietly=TRUE) ){ + tinytest::test_package("LMMsolver") + } test_GLMM.R................... 0 tests test_GLMM.R................... 0 tests test_GLMM.R................... 0 tests test_GLMM.R................... 0 tests test_GLMM.R................... 0 tests test_GLMM.R................... 0 tests test_GLMM.R................... 0 tests test_GLMM.R................... 0 tests test_GLMM.R................... 0 tests test_GLMM.R................... 1 tests 1 fails test_GLMM.R................... 1 tests 1 fails test_GLMM.R................... 2 tests 1 fails 2.4s test_LMMsolve-class.R......... 0 tests test_LMMsolve-class.R......... 0 tests test_LMMsolve-class.R......... 0 tests test_LMMsolve-class.R......... 1 tests OK test_LMMsolve-class.R......... 2 tests OK test_LMMsolve-class.R......... 2 tests OK test_LMMsolve-class.R......... 3 tests OK test_LMMsolve-class.R......... 4 tests OK test_LMMsolve-class.R......... 5 tests OK test_LMMsolve-class.R......... 6 tests OK test_LMMsolve-class.R......... 7 tests OK test_LMMsolve-class.R......... 8 tests OK test_LMMsolve-class.R......... 9 tests OK test_LMMsolve-class.R......... 10 tests OK test_LMMsolve-class.R......... 11 tests OK test_LMMsolve-class.R......... 11 tests OK test_LMMsolve-class.R......... 12 tests OK test_LMMsolve-class.R......... 13 tests OK test_LMMsolve-class.R......... 14 tests OK test_LMMsolve-class.R......... 14 tests OK test_LMMsolve-class.R......... 15 tests OK test_LMMsolve-class.R......... 16 tests OK test_LMMsolve-class.R......... 17 tests OK test_LMMsolve-class.R......... 18 tests OK test_LMMsolve-class.R......... 18 tests OK test_LMMsolve-class.R......... 19 tests OK test_LMMsolve-class.R......... 19 tests OK test_LMMsolve-class.R......... 20 tests OK 0.3s test_LMMsolve.R............... 0 tests test_LMMsolve.R............... 1 tests OK test_LMMsolve.R............... 2 tests OK test_LMMsolve.R............... 3 tests OK test_LMMsolve.R............... 4 tests OK test_LMMsolve.R............... 5 tests OK test_LMMsolve.R............... 6 tests OK test_LMMsolve.R............... 7 tests OK test_LMMsolve.R............... 7 tests OK test_LMMsolve.R............... 7 tests OK test_LMMsolve.R............... 7 tests OK test_LMMsolve.R............... 7 tests OK test_LMMsolve.R............... 7 tests OK test_LMMsolve.R............... 7 tests OK test_LMMsolve.R............... 7 tests OK test_LMMsolve.R............... 8 tests OK test_LMMsolve.R............... 9 tests OK test_LMMsolve.R............... 10 tests OK test_LMMsolve.R............... 11 tests OK test_LMMsolve.R............... 12 tests OK test_LMMsolve.R............... 13 tests OK test_LMMsolve.R............... 14 tests OK test_LMMsolve.R............... 14 tests OK test_LMMsolve.R............... 15 tests OK test_LMMsolve.R............... 16 tests OK test_LMMsolve.R............... 17 tests OK test_LMMsolve.R............... 17 tests OK test_LMMsolve.R............... 17 tests OK test_LMMsolve.R............... 17 tests OK test_LMMsolve.R............... 17 tests OK test_LMMsolve.R............... 17 tests OK test_LMMsolve.R............... 17 tests OK test_LMMsolve.R............... 17 tests OK test_LMMsolve.R............... 17 tests OK test_LMMsolve.R............... 17 tests OK test_LMMsolve.R............... 17 tests OK test_LMMsolve.R............... 17 tests OK test_LMMsolve.R............... 17 tests OK test_LMMsolve.R............... 18 tests OK test_LMMsolve.R............... 19 tests OK test_LMMsolve.R............... 20 tests OK test_LMMsolve.R............... 21 tests OK test_LMMsolve.R............... 22 tests OK test_LMMsolve.R............... 23 tests OK test_LMMsolve.R............... 23 tests OK test_LMMsolve.R............... 23 tests OK test_LMMsolve.R............... 24 tests OK test_LMMsolve.R............... 25 tests OK test_LMMsolve.R............... 26 tests OK test_LMMsolve.R............... 26 tests OK test_LMMsolve.R............... 26 tests OK test_LMMsolve.R............... 26 tests OK test_LMMsolve.R............... 27 tests OK test_LMMsolve.R............... 28 tests OK test_LMMsolve.R............... 28 tests OK test_LMMsolve.R............... 28 tests OK test_LMMsolve.R............... 29 tests OK test_LMMsolve.R............... 29 tests OK test_LMMsolve.R............... 29 tests OK test_LMMsolve.R............... 30 tests OK test_LMMsolve.R............... 30 tests OK test_LMMsolve.R............... 30 tests OK test_LMMsolve.R............... 31 tests OK test_LMMsolve.R............... 31 tests OK test_LMMsolve.R............... 31 tests OK test_LMMsolve.R............... 31 tests OK test_LMMsolve.R............... 31 tests OK test_LMMsolve.R............... 32 tests OK test_LMMsolve.R............... 32 tests OK test_LMMsolve.R............... 32 tests OK test_LMMsolve.R............... 32 tests OK test_LMMsolve.R............... 32 tests OK test_LMMsolve.R............... 33 tests OK test_LMMsolve.R............... 34 tests OK test_LMMsolve.R............... 35 tests OK test_LMMsolve.R............... 36 tests OK test_LMMsolve.R............... 36 tests OK test_LMMsolve.R............... 36 tests OK test_LMMsolve.R............... 36 tests OK test_LMMsolve.R............... 36 tests OK test_LMMsolve.R............... 37 tests OK test_LMMsolve.R............... 38 tests OK test_LMMsolve.R............... 38 tests OK test_LMMsolve.R............... 38 tests OK test_LMMsolve.R............... 39 tests OK test_LMMsolve.R............... 40 tests OK 0.7s test_conditionalFactor.R...... 0 tests test_conditionalFactor.R...... 1 tests OK test_conditionalFactor.R...... 2 tests OK test_conditionalFactor.R...... 3 tests OK test_conditionalFactor.R...... 4 tests OK test_conditionalFactor.R...... 5 tests OK test_conditionalFactor.R...... 5 tests OK test_conditionalFactor.R...... 5 tests OK test_conditionalFactor.R...... 6 tests OK test_conditionalFactor.R...... 6 tests OK test_conditionalFactor.R...... 6 tests OK test_conditionalFactor.R...... 7 tests OK 0.2s test_gam.R.................... 0 tests test_gam.R.................... 0 tests test_gam.R.................... 1 tests OK test_gam.R.................... 2 tests OK test_gam.R.................... 3 tests OK test_gam.R.................... 4 tests OK test_gam.R.................... 5 tests OK test_gam.R.................... 5 tests OK test_gam.R.................... 5 tests OK test_gam.R.................... 6 tests OK 0.1s test_obtainSmoothTrend.R...... 0 tests test_obtainSmoothTrend.R...... 0 tests test_obtainSmoothTrend.R...... 0 tests test_obtainSmoothTrend.R...... 0 tests test_obtainSmoothTrend.R...... 1 tests OK test_obtainSmoothTrend.R...... 2 tests OK test_obtainSmoothTrend.R...... 3 tests OK test_obtainSmoothTrend.R...... 4 tests OK test_obtainSmoothTrend.R...... 5 tests OK test_obtainSmoothTrend.R...... 6 tests OK test_obtainSmoothTrend.R...... 6 tests OK test_obtainSmoothTrend.R...... 7 tests OK test_obtainSmoothTrend.R...... 8 tests OK test_obtainSmoothTrend.R...... 8 tests OK test_obtainSmoothTrend.R...... 9 tests OK test_obtainSmoothTrend.R...... 9 tests OK test_obtainSmoothTrend.R...... 10 tests OK test_obtainSmoothTrend.R...... 10 tests OK test_obtainSmoothTrend.R...... 10 tests OK test_obtainSmoothTrend.R...... 10 tests OK test_obtainSmoothTrend.R...... 11 tests OK test_obtainSmoothTrend.R...... 12 tests OK test_obtainSmoothTrend.R...... 12 tests OK test_obtainSmoothTrend.R...... 12 tests OK test_obtainSmoothTrend.R...... 12 tests OK test_obtainSmoothTrend.R...... 13 tests OK test_obtainSmoothTrend.R...... 13 tests OK test_obtainSmoothTrend.R...... 13 tests OK test_obtainSmoothTrend.R...... 14 tests OK test_obtainSmoothTrend.R...... 15 tests OK test_obtainSmoothTrend.R...... 15 tests OK test_obtainSmoothTrend.R...... 16 tests OK test_obtainSmoothTrend.R...... 16 tests OK test_obtainSmoothTrend.R...... 17 tests OK 0.6s test_spl1D.R.................. 0 tests test_spl1D.R.................. 1 tests OK test_spl1D.R.................. 2 tests OK test_spl1D.R.................. 3 tests OK test_spl1D.R.................. 4 tests OK test_spl1D.R.................. 5 tests OK test_spl1D.R.................. 6 tests OK test_spl1D.R.................. 7 tests OK test_spl1D.R.................. 8 tests OK test_spl1D.R.................. 9 tests OK test_spl1D.R.................. 10 tests OK test_spl1D.R.................. 11 tests OK test_spl1D.R.................. 11 tests OK test_spl1D.R.................. 11 tests OK test_spl1D.R.................. 12 tests OK test_spl1D.R.................. 12 tests OK test_spl1D.R.................. 12 tests OK test_spl1D.R.................. 12 tests OK test_spl1D.R.................. 13 tests OK test_spl1D.R.................. 13 tests OK test_spl1D.R.................. 14 tests OK test_spl1D.R.................. 15 tests OK test_spl1D.R.................. 15 tests OK test_spl1D.R.................. 15 tests OK test_spl1D.R.................. 16 tests OK test_spl1D.R.................. 17 tests OK test_spl1D.R.................. 18 tests OK 0.4s test_spl2D.R.................. 0 tests test_spl2D.R.................. 0 tests test_spl2D.R.................. 1 tests OK test_spl2D.R.................. 2 tests OK test_spl2D.R.................. 3 tests OK test_spl2D.R.................. 4 tests OK test_spl2D.R.................. 5 tests OK test_spl2D.R.................. 6 tests OK test_spl2D.R.................. 7 tests OK test_spl2D.R.................. 8 tests OK test_spl2D.R.................. 9 tests OK test_spl2D.R.................. 10 tests OK test_spl2D.R.................. 11 tests OK test_spl2D.R.................. 12 tests OK test_spl2D.R.................. 13 tests OK test_spl2D.R.................. 14 tests OK test_spl2D.R.................. 14 tests OK test_spl2D.R.................. 14 tests OK test_spl2D.R.................. 15 tests OK test_spl2D.R.................. 15 tests OK test_spl2D.R.................. 15 tests OK test_spl2D.R.................. 16 tests OK test_spl2D.R.................. 17 tests OK test_spl2D.R.................. 18 tests OK 0.5s test_spl3D.R.................. 0 tests test_spl3D.R.................. 1 tests OK test_spl3D.R.................. 2 tests OK test_spl3D.R.................. 3 tests OK test_spl3D.R.................. 4 tests OK test_spl3D.R.................. 5 tests OK test_spl3D.R.................. 6 tests OK test_spl3D.R.................. 7 tests OK test_spl3D.R.................. 8 tests OK test_spl3D.R.................. 9 tests OK test_spl3D.R.................. 10 tests OK test_spl3D.R.................. 11 tests OK test_spl3D.R.................. 12 tests OK test_spl3D.R.................. 13 tests OK test_spl3D.R.................. 14 tests OK test_spl3D.R.................. 15 tests OK test_spl3D.R.................. 16 tests OK test_spl3D.R.................. 16 tests OK test_spl3D.R.................. 16 tests OK test_spl3D.R.................. 17 tests OK 0.4s ----- FAILED[data]: test_GLMM.R<19--19> call| expect_equal_to_reference(obj1, "GLMMFull", check.attributes = FALSE) diff| current does not match target read from GLMMFull diff| Component "family": Length mismatch: comparison on first 12 components Error: 1 out of 145 tests failed Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking re-building of vignette outputs ... [18s] OK * checking PDF version of manual ... OK * DONE Status: 1 ERROR