* using log directory 'd:/Rcompile/CRANpkg/local/4.1/ModelMap.Rcheck' * using R version 4.1.3 (2022-03-10) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'ModelMap/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'ModelMap' version '3.4.0.3' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'ModelMap' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [47s] OK * checking Rd files ... [1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [18s] OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking re-building of vignette outputs ... [138s] WARNING Error(s) in re-building vignettes: --- re-building 'ExploreModelMap.Rnw' using Sweave Loading required package: randomForest randomForest 4.7-1.1 Type rfNews() to see new features/changes/bug fixes. Loading required package: raster Loading required package: sp Loading required package: rgdal Please note that rgdal will be retired during 2023, plan transition to sf/stars/terra functions using GDAL and PROJ at your earliest convenience. See https://r-spatial.org/r/2022/04/12/evolution.html and https://github.com/r-spatial/evolution rgdal: version: 1.6-6, (SVN revision 1201) Geospatial Data Abstraction Library extensions to R successfully loaded Loaded GDAL runtime: GDAL 3.4.1, released 2021/12/27 Path to GDAL shared files: D:/temp/Rtmpgff2XF/RLIBS_2810700f53f7/rgdal/gdal GDAL binary built with GEOS: TRUE Loaded PROJ runtime: Rel. 7.2.1, January 1st, 2021, [PJ_VERSION: 721] Path to PROJ shared files: D:/temp/Rtmpgff2XF/RLIBS_2810700f53f7/rgdal/proj PROJ CDN enabled: FALSE Linking to sp version:1.6-0 To mute warnings of possible GDAL/OSR exportToProj4() degradation, use options("rgdal_show_exportToProj4_warnings"="none") before loading sp or rgdal. --- finished re-building 'ExploreModelMap.Rnw' --- re-building 'VModelMap.Rnw' using Sweave Loading required package: randomForest randomForest 4.7-1.1 Type rfNews() to see new features/changes/bug fixes. Loading required package: raster Loading required package: sp Loading required package: rgdal Please note that rgdal will be retired during 2023, plan transition to sf/stars/terra functions using GDAL and PROJ at your earliest convenience. See https://r-spatial.org/r/2022/04/12/evolution.html and https://github.com/r-spatial/evolution rgdal: version: 1.6-6, (SVN revision 1201) Geospatial Data Abstraction Library extensions to R successfully loaded Loaded GDAL runtime: GDAL 3.4.1, released 2021/12/27 Path to GDAL shared files: D:/temp/Rtmpgff2XF/RLIBS_2810700f53f7/rgdal/gdal GDAL binary built with GEOS: TRUE Loaded PROJ runtime: Rel. 7.2.1, January 1st, 2021, [PJ_VERSION: 721] Path to PROJ shared files: D:/temp/Rtmpgff2XF/RLIBS_2810700f53f7/rgdal/proj PROJ CDN enabled: FALSE Linking to sp version:1.6-0 To mute warnings of possible GDAL/OSR exportToProj4() degradation, use options("rgdal_show_exportToProj4_warnings"="none") before loading sp or rgdal. Warning in FNcheck(OUTPUTfn = OUTPUTfn, folder = folder, ERROR.NAME = "OUTPUTfn") : OUTPUTfn VModelMapEx1a_map does not include an extension, using default extension of '.img'. New OUTPUTfn is VModelMapEx1a_map.img Error: processing vignette 'VModelMap.Rnw' failed with diagnostics: chunk 24 (label = Ex1 Produce Maps) Error in .rasterObjectFromFile(x, band = band, objecttype = "RasterLayer", : Cannot create a RasterLayer object from this file. --- failed re-building 'VModelMap.Rnw' --- re-building 'Vquantile.Rnw' using Sweave Loading required package: randomForest randomForest 4.7-1.1 Type rfNews() to see new features/changes/bug fixes. Loading required package: raster Loading required package: sp Loading required package: rgdal Please note that rgdal will be retired during 2023, plan transition to sf/stars/terra functions using GDAL and PROJ at your earliest convenience. See https://r-spatial.org/r/2022/04/12/evolution.html and https://github.com/r-spatial/evolution rgdal: version: 1.6-6, (SVN revision 1201) Geospatial Data Abstraction Library extensions to R successfully loaded Loaded GDAL runtime: GDAL 3.4.1, released 2021/12/27 Path to GDAL shared files: D:/temp/Rtmpgff2XF/RLIBS_2810700f53f7/rgdal/gdal GDAL binary built with GEOS: TRUE Loaded PROJ runtime: Rel. 7.2.1, January 1st, 2021, [PJ_VERSION: 721] Path to PROJ shared files: D:/temp/Rtmpgff2XF/RLIBS_2810700f53f7/rgdal/proj PROJ CDN enabled: FALSE Linking to sp version:1.6-0 To mute warnings of possible GDAL/OSR exportToProj4() degradation, use options("rgdal_show_exportToProj4_warnings"="none") before loading sp or rgdal. Warning in FNcheck(OUTPUTfn = OUTPUTfn, folder = folder, ERROR.NAME = "OUTPUTfn") : OUTPUTfn VQuantile_QRF_Pinyon_map does not include an extension, using default extension of '.img'. New OUTPUTfn is VQuantile_QRF_Pinyon_map.img Error: processing vignette 'Vquantile.Rnw' failed with diagnostics: chunk 20 (label = Ex1 Produce Maps) Error in .rasterObjectFromFile(x, band = band, objecttype = "RasterLayer", : Cannot create a RasterLayer object from this file. --- failed re-building 'Vquantile.Rnw' SUMMARY: processing the following files failed: 'VModelMap.Rnw' 'Vquantile.Rnw' Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... OK * DONE Status: 1 WARNING