ARUtools 0.6.2

ARUtools 0.6.2

• Initial CRAN submission.

New

Changes made to improve clarity for CRAN submission.

ARUtools 0.6.0

New

• Cleaned up functions for recording selection, spectrograms, clipping waves, acoustic indices and creating dirs (#8, #11, #12, #13, #23)
• Added NSE for relevant functions, these now use col_COLNAME, changed arguments for non-NSE functions to name_COLNAME (#15)
• Ensure that data order is unchanged when passing through cleaning functions (#19)
• Added sampling vignette

Bugs

• Fixed bug calc_sun() corrupting date column (#18)

ARUtools 0.5.1

New

• add_wildtrax() - New helper function to create and append WildTrax file names

Bugs

• clean_gps() - Fixed errors when processing only GPX files

ARUtools 0.5.0

• clean_gps()
  • can handle GPX files via sf now
  • distance cutoff results in a warning (not an error), returning the data with the max_dist column, so users can see which site was problematic.
  • now checks for distance by site groups aru_id and site_id by default
  • pattern matches for GPS column headers have been expanded
  • catches errors but continues reporting on failed loading (remove skip_bad argument)
  • check_problems() now also checks GPS meta data
• create_pattern_XXX()
  • Now accept multiple options
  • all separators are non-optional, but provide "" as pseudo-optional
  • create_pattern_site_id() ids do not have to have a suffix

• clean_metadata() accepts multiple pattern options

• clean_site_index() allows no date columns (col_date_time = NULL)

• add_sites()
  • Rename dt_type to by_date
  • Take mean of multiple sites with by_date = "date" (instead of truncating)
  • Use by_date = NULL to skip joining by date range
• Workflow now works with sf input (must be POINT geometries)
  • clean_site_index()
  • add_sites()
  • calc_sun()
• Timezones are now more explicit
  • Expect local time marked with UTC
  • Existing non-UTC timezones are stripped with a message
  • Errors returned if there are more than one relevant date_time column with different timezones
• Vignettes
  • Mini spatial workflow (vignettes/spatial.Rmd)
  • Explaining timezones (vignettes/timezones.Rmd)

ARUtools 0.4.0.9000

• Major overhaul of first half of the workflow
• Main functions now
• clean_metadata()
• clean_gps() / clean_site_index()
• add_sites()
• calc_sun()
• Helper functions for checking, and for creating regex patterns