CRAN Package Check Results for Package ff

Last updated on 2018-04-20 12:49:22 CEST.

Check Details

Version: 2.2-13
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     as.hi.logical keyorder.default keysort.default mergeorder.default
     mergesort.default radixorder.default radixsort.default
     ramorder.default ramsort.default shellorder.default shellsort.default
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64

Version: 2.2-13
Check: R code for possible problems
Result: NOTE
    bigsample.default: no visible global function definition for ‘runif’
    cmedian: no visible binding for global variable ‘median’
    cquantile: no visible binding for global variable ‘quantile’
    read.table.ffdf: no visible binding for global variable ‘read.fwf’
    read.table.ffdf: no visible binding for global variable ‘read.table’
    regtest.fforder: no visible global function definition for ‘runif’
    str.ff: no visible global function definition for ‘str’
    str.ffdf: no visible global function definition for ‘str’
    str.hi: no visible global function definition for ‘str’
    write.csv: no visible binding for global variable ‘write.table’
    write.csv2: no visible binding for global variable ‘write.table’
    Undefined global functions or variables:
     median quantile read.fwf read.table runif str write.table
    Consider adding
     importFrom("stats", "median", "quantile", "runif")
     importFrom("utils", "read.fwf", "read.table", "str", "write.table")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-devel-osx-x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64

Version: 2.2-13
Check: compiled code
Result: NOTE
    File ‘ff/libs/ff.so’:
     Found no call to: ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 2.2-13
Check: examples
Result: ERROR
    Running examples in ‘ff-Ex.R’ failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: as.hi
    > ### Title: Hybrid Index, coercion to
    > ### Aliases: as.hi as.hi.hi as.hi.ri as.hi.bit as.hi.bitwhich as.hi.call
    > ### as.hi.name as.hi.( as.hi.integer as.hi.which as.hi.double
    > ### as.hi.logical as.hi.character as.hi.matrix
    > ### Keywords: IO data
    >
    > ### ** Examples
    >
    > message("integer indexing with and without rel-packing")
    integer indexing with and without rel-packing
    > as.hi(1:12)
    hybrid index (hi) from 1 to 12 over <rle position diffs> re=FALSE ix=NULL
    minindex=1 maxindex=NA length=12 poslength=12
    > as.hi(1:12, pack=FALSE)
    hybrid index (hi) from 1 to 12 over <plain positions> re=FALSE ix=NULL
    minindex=1 maxindex=NA length=12 poslength=12
    > message("if index is double, the wrapper method just converts to integer")
    if index is double, the wrapper method just converts to integer
    > as.hi(as.double(1:12))
    hybrid index (hi) from 1 to 12 over <rle position diffs> re=FALSE ix=NULL
    minindex=1 maxindex=NA length=12 poslength=12
    > message("if index is character, the wrapper method just converts to integer")
    if index is character, the wrapper method just converts to integer
    > as.hi(c("a","b","c"), names=letters)
    hybrid index (hi) from 1 to 3 over <plain positions> re=FALSE ix=NULL
    minindex=1 maxindex=NA length=3 poslength=3
    > message("negative index must use maxindex (or vw)")
    negative index must use maxindex (or vw)
    > as.hi(-(1:3), maxindex=12)
    hybrid index (hi) from -3 to -1 over <plain positions> re=FALSE ix=NULL
    minindex=1 maxindex=12 length=3 poslength=9
    > message("logical index can use maxindex")
    logical index can use maxindex
    > as.hi(c(FALSE, FALSE, TRUE, TRUE))
    Error in UseMethod("as.hi") :
     no applicable method for 'as.hi' applied to an object of class "logical"
    Calls: as.hi
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64

Version: 2.2-13
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     ff.cpp:256:16: warning: 'long long' is a C++11 extension [-Wc++11-long-long]
     ff.cpp:256:54: warning: 'long long' is a C++11 extension [-Wc++11-long-long]
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 2.2-13
Check: S3 generic/method consistency
Result: WARN
    row.names<-:
     function(x, make.names, value)
    row.names<-.ffdf:
     function(x, value)
    
    row.names<-:
     function(x, make.names, value)
    row.names<-.ffdf:
     function(x, value)
    
    See section ‘Generic functions and methods’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-devel-osx-x86_64